Gene Shewana3_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0002 
Symbol 
ID4477441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp777 
End bp2666 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content48% 
IMG OID639724518 
ProducttRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 
Protein accessionYP_867653 
Protein GI117918461 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division 
TIGRFAM ID[TIGR00136] glucose-inhibited division protein A 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.72668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000225691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTAGGTG GTGGTCATGC CGGAACTGAA 
GCCGCATTGG CTGCAGCAAG AATGGGCTCT AAGACATTAT TGCTGACGCA TAATCTTGAT
ACTTTAGGCC AAATGTCATG CAATCCTGCG ATCGGCGGTA TTGGCAAAGG TCATCTGGTA
AAAGAAATCG ATGCCTTAGG CGGTGCAATG GCGATCGCAA CCGACTATGC AGGGATCCAA
TTTAGAACCC TAAACTCGAG CAAAGGTCCA GCAGTAAGAG CGACTCGTGC TCAGGCTGAT
CGCGCTTTGT ATCGTCAGAA GATCCAAAAT ATTCTGCAAA ACCAAGCCAA CTTACGTATT
TTCCAACAAG CCGTTGATGA TCTGGTGGTT GATAACGATC GCGTAGTCGG CGTAGTGACC
CAAATGGGCT TAGCCTTCGA AGCGCCTGCA GTGGTCTTAA CCGCGGGGAC TTTCCTCAGT
GGTAAAATTC ACATTGGTTT AGAAAACTAC AGTGGCGGTC GTGCTGGTGA TCCACCATCT
ATCGCACTCG CCCACCGTTT ACGTGAGTTG CCAATCCGTG TTGGCCGCTT AAAAACGGGT
ACGCCACCAC GTATCGATGC CAATACCATC GATTTTACCC AGATGACTGA GCAGAAAGGC
GACACGCCAT TACCTGTGAT GTCGTTTATG GGCGATGTAA GCCATCACCC GAAACAAATT
TCTTGTTGGA TCACCCATAC CAATGAAAAG ACACACGATA TTATTCGTGG AGGCTTAGAT
CGCAGCCCGA TGTATTCAGG CGTGATCGAA GGGATTGGTC CACGTTACTG CCCTTCTATC
GAAGACAAGA TCCATCGTTT TTCAGATAAA TCATCACACC AGATCTTTAT CGAACCCGAA
GGCTTAAACA CCAACGAGAT CTACCCTAAC GGTATTTCCA CCAGCTTGCC TTTCGATGTG
CAGTTAAATC TGGTTCGTTC GATCCAAGGT ATGGAAAATG CTGAGATTGT TCGCCCAGGT
TATGCGATTG AGTATGATTA TTTCGATCCA AGGGATCTTA AAAACTCGTT AGAAACCAAA
ACCATCAATG GTTTGTTCTT CGCGGGCCAA ATCAACGGTA CCACGGGTTA TGAAGAAGCC
GGCGCCCAAG GTTTACTCGC GGGGATGAAC GCTGCACTGC AGGTTCAGGG CAAAGAAGCT
TGGTGTCCTC GCCGTGATGA AGCCTACATA GGTGTATTGG TTGACGATTT ATCAACCTTA
GGGACTAAAG AACCCTACCG CATGTTTACC AGCCGCGCTG AATACCGCCT ATTGCTGCGT
GAAGACAACG CCGACCTGCG TTTAACCGCA AAAGGTCGTG AACTGGGTCT GGTGGATGAT
GCGCGTTGGG CCTCTTTCAG TGAAAAAATG GAATCGATCG AGTTAGAACT GCAACGTCTA
CGTAGCCAAT GGATCCATCC AAATTCACCA TTGGTGCCAG TGTTAAATCC GCATTTAAAC
ACGCCTATCT CCCGTGAAGC GTCGTTTGAA GAGTTGCTGC GTCGTCCAGA AATGGATTAC
AGCAAGTTGA TGCAGATTGA AGGTTTTGGT CCAGGACTTG CCGATCCACT CGCAGCCGAG
CAAGTACAGA TCCAAGTGAA GTACTCTGGC TATATCCAAC GTCAGCAGGA AGAGATCAAC
AAAGCGGTAC GCAATGAGAA CACTGGTTTG CCATTGAACC TTGATTACAA AGAGGTTCCA
GGGCTTTCAA ATGAGGTTAT TGCTAAGTTA AATAGCCATA AGCCCGAAAC TATTGGCCAA
GCATCGCGTA TCTCAGGGAT TACGCCAGCA GCGATTTCAA TTCTGCTGGT GCATCTGAAA
AAACGCGGTT TATTACGCAA GAGCGCGTAA
 
Protein sequence
MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNLD TLGQMSCNPA IGGIGKGHLV 
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQANLRI
FQQAVDDLVV DNDRVVGVVT QMGLAFEAPA VVLTAGTFLS GKIHIGLENY SGGRAGDPPS
IALAHRLREL PIRVGRLKTG TPPRIDANTI DFTQMTEQKG DTPLPVMSFM GDVSHHPKQI
SCWITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE
GLNTNEIYPN GISTSLPFDV QLNLVRSIQG MENAEIVRPG YAIEYDYFDP RDLKNSLETK
TINGLFFAGQ INGTTGYEEA GAQGLLAGMN AALQVQGKEA WCPRRDEAYI GVLVDDLSTL
GTKEPYRMFT SRAEYRLLLR EDNADLRLTA KGRELGLVDD ARWASFSEKM ESIELELQRL
RSQWIHPNSP LVPVLNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLADPLAAE
QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLNLDYKEVP GLSNEVIAKL NSHKPETIGQ
ASRISGITPA AISILLVHLK KRGLLRKSA