Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0002 |
Symbol | |
ID | 4477441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 777 |
End bp | 2666 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724518 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_867653 |
Protein GI | 117918461 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.72668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000225691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTAGGTG GTGGTCATGC CGGAACTGAA GCCGCATTGG CTGCAGCAAG AATGGGCTCT AAGACATTAT TGCTGACGCA TAATCTTGAT ACTTTAGGCC AAATGTCATG CAATCCTGCG ATCGGCGGTA TTGGCAAAGG TCATCTGGTA AAAGAAATCG ATGCCTTAGG CGGTGCAATG GCGATCGCAA CCGACTATGC AGGGATCCAA TTTAGAACCC TAAACTCGAG CAAAGGTCCA GCAGTAAGAG CGACTCGTGC TCAGGCTGAT CGCGCTTTGT ATCGTCAGAA GATCCAAAAT ATTCTGCAAA ACCAAGCCAA CTTACGTATT TTCCAACAAG CCGTTGATGA TCTGGTGGTT GATAACGATC GCGTAGTCGG CGTAGTGACC CAAATGGGCT TAGCCTTCGA AGCGCCTGCA GTGGTCTTAA CCGCGGGGAC TTTCCTCAGT GGTAAAATTC ACATTGGTTT AGAAAACTAC AGTGGCGGTC GTGCTGGTGA TCCACCATCT ATCGCACTCG CCCACCGTTT ACGTGAGTTG CCAATCCGTG TTGGCCGCTT AAAAACGGGT ACGCCACCAC GTATCGATGC CAATACCATC GATTTTACCC AGATGACTGA GCAGAAAGGC GACACGCCAT TACCTGTGAT GTCGTTTATG GGCGATGTAA GCCATCACCC GAAACAAATT TCTTGTTGGA TCACCCATAC CAATGAAAAG ACACACGATA TTATTCGTGG AGGCTTAGAT CGCAGCCCGA TGTATTCAGG CGTGATCGAA GGGATTGGTC CACGTTACTG CCCTTCTATC GAAGACAAGA TCCATCGTTT TTCAGATAAA TCATCACACC AGATCTTTAT CGAACCCGAA GGCTTAAACA CCAACGAGAT CTACCCTAAC GGTATTTCCA CCAGCTTGCC TTTCGATGTG CAGTTAAATC TGGTTCGTTC GATCCAAGGT ATGGAAAATG CTGAGATTGT TCGCCCAGGT TATGCGATTG AGTATGATTA TTTCGATCCA AGGGATCTTA AAAACTCGTT AGAAACCAAA ACCATCAATG GTTTGTTCTT CGCGGGCCAA ATCAACGGTA CCACGGGTTA TGAAGAAGCC GGCGCCCAAG GTTTACTCGC GGGGATGAAC GCTGCACTGC AGGTTCAGGG CAAAGAAGCT TGGTGTCCTC GCCGTGATGA AGCCTACATA GGTGTATTGG TTGACGATTT ATCAACCTTA GGGACTAAAG AACCCTACCG CATGTTTACC AGCCGCGCTG AATACCGCCT ATTGCTGCGT GAAGACAACG CCGACCTGCG TTTAACCGCA AAAGGTCGTG AACTGGGTCT GGTGGATGAT GCGCGTTGGG CCTCTTTCAG TGAAAAAATG GAATCGATCG AGTTAGAACT GCAACGTCTA CGTAGCCAAT GGATCCATCC AAATTCACCA TTGGTGCCAG TGTTAAATCC GCATTTAAAC ACGCCTATCT CCCGTGAAGC GTCGTTTGAA GAGTTGCTGC GTCGTCCAGA AATGGATTAC AGCAAGTTGA TGCAGATTGA AGGTTTTGGT CCAGGACTTG CCGATCCACT CGCAGCCGAG CAAGTACAGA TCCAAGTGAA GTACTCTGGC TATATCCAAC GTCAGCAGGA AGAGATCAAC AAAGCGGTAC GCAATGAGAA CACTGGTTTG CCATTGAACC TTGATTACAA AGAGGTTCCA GGGCTTTCAA ATGAGGTTAT TGCTAAGTTA AATAGCCATA AGCCCGAAAC TATTGGCCAA GCATCGCGTA TCTCAGGGAT TACGCCAGCA GCGATTTCAA TTCTGCTGGT GCATCTGAAA AAACGCGGTT TATTACGCAA GAGCGCGTAA
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Protein sequence | MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNLD TLGQMSCNPA IGGIGKGHLV KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQANLRI FQQAVDDLVV DNDRVVGVVT QMGLAFEAPA VVLTAGTFLS GKIHIGLENY SGGRAGDPPS IALAHRLREL PIRVGRLKTG TPPRIDANTI DFTQMTEQKG DTPLPVMSFM GDVSHHPKQI SCWITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE GLNTNEIYPN GISTSLPFDV QLNLVRSIQG MENAEIVRPG YAIEYDYFDP RDLKNSLETK TINGLFFAGQ INGTTGYEEA GAQGLLAGMN AALQVQGKEA WCPRRDEAYI GVLVDDLSTL GTKEPYRMFT SRAEYRLLLR EDNADLRLTA KGRELGLVDD ARWASFSEKM ESIELELQRL RSQWIHPNSP LVPVLNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLADPLAAE QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLNLDYKEVP GLSNEVIAKL NSHKPETIGQ ASRISGITPA AISILLVHLK KRGLLRKSA
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