| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3729 |
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| Symbol | |
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| ID | 4482459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4682766 |
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| End bp | 4684286 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724485 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_867620 |
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| Protein GI | 117927003 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00128644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG AAATTTTACA GGTAGCCGAT CAGGTTGCGC GGGAAAAGGG TATTGATCGC
AAGGTTGTGA TCGAAGCCAT GGAGAGTGCC ATTCAGACCG CTTCGCGCAA GAAGTATGGT
GCCAATAAAA ATATTCAGGC CCGCTTTGAT CCCAAATCTG GAGAGTTTCA ACTAAACCAG
CTGCGTGAAG TGGTGGACCT GGACCAGGAT GAAGATCTGG ATTTTGATGA GGATATCCAT
ATCTCCTTGG AAAAGGCGTT GACTATGAAC CCAGAGGCGG TGCCCGGCGA CTTTATTGCC
GAGCAGCTGC CCCCCATGGA GTTTGGCCGC ATCGCCGCAC AGACCGCCAA GCAGGTGATT
GTGCAAAAGG TGCGTGACGC CGAGCGTGAG CGCATTTTTG AAGAGTATGC GGATCGTCAA
GGCGAGATGG TCAACGGTCT GGTTAAGCGG GTTGAGCGCA ATAACATTCA TGTGGATCTG
GGTCGTACCT CGGGCTTTTT GCCTCATGAA GAGCAGCTGC CCCGTGAACA TTACCGCCCG
GGCGACCGGA TACGTGCCTT TATTAAAGAG GTGCGCGAAG TAACCCGTGG TCCGCAAATT
ATTCTTTCGC GCACCCATCC CCAAATGGTG GTACGCTTGT TCGAGATGGA GGTCCCCGAG
ATCTACGACG GCATTGTCGA GATTAAGGCG GTTGCGCGTG ATCCGGGTCA TCGTAGTAAA
ATCGCTGTAC GTTCCAATGA TGCCCATGTG GATCCTGTTG GGGCCTGTGT GGGGATGCGT
GGCTCCCGTG TGCAGAGTGT GGTGACGGAG CTGCAAGGGG AGCGCATTGA TATTATTGAG
TGGTCCCACG ACCCCGCCGT GTTTGTGTGT AACGCCCTAG CCCCGGCTGA GGTGGTTAAG
GTGGTGGTGG ACGAGGAGGA TCGCAACATC AAGGTGGTGG TGGATGAAAC CGCCCTCTCC
TTGGCCATTG GTCGGCGTGG TCAAAACGTG CGTTTGGCAT CGGAGCTGAC GGGATGGCGC
ATTGATATTA TTACCGAGCA GGAAGAGCGT AACCTACGCG AAGAGATGTT TGGTGAGCTG
CAACAGACCT TCATGAAGGA TTTGGATCTG GGTGAAGAGG TGGCGGCTGT CTTGGTCAAC
GAAGGTTTTA CTTCGGCGGA AGAGGTGGCC TATGTGCCCC TGAACGAGCT GACCAGCATC
GAGGGTTTTG ATGAAGAGAT TGCGCAAGAG TTGCGCAACC GGGCCCGGGA TACACTGCTG
CAACAGGCGT TACAGACCGA AGAGCGCAAG GCCGAGCTGC ACATTGACGA GCGTTTGGCG
CAGTTGGGTC TGTTGACCGA TGATGCTCTG ATTGCGTTGG CTGAAAAAAA TGTTAACACC
CTGGATGATT TGGCCGATCT GGCTACCGAT GAATTGGTGG AGATGTTCGA CGGTGAGCTG
ACGACTGAGG ATGCCGAAAC CTTGATCCTG GGAGCCCGCC GTGCGGCTGG ATGGTTTGAT
GACGAGGAAG AAACCGCATA A
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| Protein sequence | MTVEILQVAD QVAREKGIDR KVVIEAMESA IQTASRKKYG ANKNIQARFD PKSGEFQLNQ
LREVVDLDQD EDLDFDEDIH ISLEKALTMN PEAVPGDFIA EQLPPMEFGR IAAQTAKQVI
VQKVRDAERE RIFEEYADRQ GEMVNGLVKR VERNNIHVDL GRTSGFLPHE EQLPREHYRP
GDRIRAFIKE VREVTRGPQI ILSRTHPQMV VRLFEMEVPE IYDGIVEIKA VARDPGHRSK
IAVRSNDAHV DPVGACVGMR GSRVQSVVTE LQGERIDIIE WSHDPAVFVC NALAPAEVVK
VVVDEEDRNI KVVVDETALS LAIGRRGQNV RLASELTGWR IDIITEQEER NLREEMFGEL
QQTFMKDLDL GEEVAAVLVN EGFTSAEEVA YVPLNELTSI EGFDEEIAQE LRNRARDTLL
QQALQTEERK AELHIDERLA QLGLLTDDAL IALAEKNVNT LDDLADLATD ELVEMFDGEL
TTEDAETLIL GARRAAGWFD DEEETA
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