| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3722 |
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| Symbol | |
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| ID | 4482452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4675071 |
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| End bp | 4677176 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724478 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_867613 |
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| Protein GI | 117926996 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA TTCATACTAA GAGTGTTCAA TTCGGCGAGA AAACCATCAC GCTGGAAACG
GGTCGTGTAG CCCGTCAAGC CAATGGTGCC GTCATGGTAA CCTATGGTGA TACCGTTGTG
CTGGTCACGG CTGTGGCAGA GACCAGCATG CGTGCCGGTC AGGATTTTTT TCCCCTTAGC
GTTCATTATC AAGAGAAATT TTGGGCTGCT GGTAAAATTC CTGGCGGCTT TATTAAGCGT
GAAACCCGTC CTTCGGAACG TGAAGTATTA ACTTCGCGTT TGATTGACCG TCCCATTCGT
CCGCTGTTCC CCAAGGGTTT CATGAACGAG ACCCAGGTGG TGGCTCAGGT GCTCTCTTAT
GATCCTGACT ATCCGTCGGA CATTGCCGCT TTGATCGGTT GTTCGGCAGC CTTGGCGCTG
TCGGGTGTAC CCTTCGAGGG TCCCATTGGT GGGGCGCGGG TGGGTTTTAT TGATGGCAAG
CCGGTACTCA ACCCCACGGT TGATCAGTTG GCCGCAAGTC GTCTGGATCT GGTGGTTGCC
GGTACCCGTA GTGCCGTGAC CATGGTGGAG TCGGAAGTGG ACTTCTTGAG CGAAGATGAG
ATGCTTGACT GCGTCATGTT TGCGCACGAG TCGTTTCAAC CCGTGATTAC CGCCATTGAA
GAGTTGGTGG CAGAGGCTGG TAAGCCCCGC TGGGTGGTTG AGCCTGTGCA GGTCAATGAA
GCGCTGCTGG CGGAGATGAA CGACAAGTTT GCCGCACAAG TGACGGAGGC TTATGCCATT
CCTGAGAAGA TGGCCCGTTA TGAGGCGGTG GCTCAGGTAA AGGCCGCTGC GATGGAGGCT
TTGGGCACCA TTGAAGTGGA TGGTCAGAGC GTCAAGCGCA GCGAAGAGGT GGCCAGTCTG
TTTAAAAAGA TTGAGTCCCG CACACTGCGT CAAAATGTGT TGCAGGGCAA GCGTGTGGAT
GGTCGGGGTT TGACCGATAT CCGTCCCATC GCCTGTGAGG TTAGCATTCT GCCCCGTGTG
CATGGTACGG CGCTGTTTAC CCGTGGTGAG ACCCAGGCCA TTGCGACGGT GACGTTGGGG
ACCTCCCGTG ATGAGCAGAT TGTGGAGACC CTCTCTGGCG AGTATCGGGA CCGTTTTTAT
CTGAACTACA CCTTCCCTCC CTACTGTGTG GGTGAAACTG GCCGTATGGG GGCGCCTGGC
CGTCGCGAGA TTGGTCATGG CAAGTTGGCG ACCCGTGCGT TGACGGCCAT TGTGCCTTCA
GCGGAGGTTT TCCCTTACAC GCTGCGTATT ACCTCAGAGA TTACCGAATC CAACGGCTCT
TCTTCCATGG CGACGGTGTG TGGTGCGGTA TTGGCGATGC AGGATGCTGG TGTGCCCATC
AAGGCCCCGG TCGCTGGTAT TGCCATGGGT TTGGTCAAAG AGGGTGATGC GTACGCGGTG
CTGTCGGATA TTTTGGGTGA TGAAGATCAC CTGGGCGACA TGGATTTTAA AGTGGCGGGT
AATGCCGACG GCATTACGGC GTTGCAGATG GACATTAAGA TCACGGGGAT TACCCGTGAG
ATTATGGCCA AAGCACTGGA ACAGGCCCGT GCGGGTCGTT TGCACATCTT AGGTGAGATG
GGCAAGGCCA TGACCACCCA TCGTGCTGAG ATGTCGGCCT ATGCGCCGCG CATTCACACC
ATGAAGATCC ATCCGGACAA GATTCGTGAG GTGATTGGTT CTGGTGGTAA GGTGATCCGT
AGCATTACCG AAGAGACCGG TTGTGCCATT GATATTGAGG ATGATGGTAC CATTCGCATT
GCCTCCAGCG ATCAGGCTTC GGCTGAGCAG GCGGTGAAGA TTATCAAGTC CATTGTGGCC
GAGGTGGAAA AGGGTCAGGT TTATGAGGGC AAGGTGGTAC GTATTACCGA CTTTGGTGCC
TTTGTAAACA TTCTGCCCAA CAAGGATGGT TTGGTCCACA TTAGCCAGTT AGCCAACCGT
CGTGTGCAGA ATGTGACGGA TGTGGTGAAA GAGGGAGATG TGGTGACGGT TAAGGTACTG
GATGTAGACC GTCAGGGTCG TGTGAAGTTG ACTATGAAAG AGATGGAAGA GGGCGCTGCT
GAGTAA
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| Protein sequence | MFNIHTKSVQ FGEKTITLET GRVARQANGA VMVTYGDTVV LVTAVAETSM RAGQDFFPLS
VHYQEKFWAA GKIPGGFIKR ETRPSEREVL TSRLIDRPIR PLFPKGFMNE TQVVAQVLSY
DPDYPSDIAA LIGCSAALAL SGVPFEGPIG GARVGFIDGK PVLNPTVDQL AASRLDLVVA
GTRSAVTMVE SEVDFLSEDE MLDCVMFAHE SFQPVITAIE ELVAEAGKPR WVVEPVQVNE
ALLAEMNDKF AAQVTEAYAI PEKMARYEAV AQVKAAAMEA LGTIEVDGQS VKRSEEVASL
FKKIESRTLR QNVLQGKRVD GRGLTDIRPI ACEVSILPRV HGTALFTRGE TQAIATVTLG
TSRDEQIVET LSGEYRDRFY LNYTFPPYCV GETGRMGAPG RREIGHGKLA TRALTAIVPS
AEVFPYTLRI TSEITESNGS SSMATVCGAV LAMQDAGVPI KAPVAGIAMG LVKEGDAYAV
LSDILGDEDH LGDMDFKVAG NADGITALQM DIKITGITRE IMAKALEQAR AGRLHILGEM
GKAMTTHRAE MSAYAPRIHT MKIHPDKIRE VIGSGGKVIR SITEETGCAI DIEDDGTIRI
ASSDQASAEQ AVKIIKSIVA EVEKGQVYEG KVVRITDFGA FVNILPNKDG LVHISQLANR
RVQNVTDVVK EGDVVTVKVL DVDRQGRVKL TMKEMEEGAA E
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