Gene Mmc1_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3698 
Symbol 
ID4481035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4653626 
End bp4654018 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID639724454 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_867589 
Protein GI117926972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCT CTAACGAAGC GCGGTTACGC ATTGATAAGT GGTTATGGGC GGCCCGTTTT 
TTTAAAACCC GCGCCCTTGC CACCGATGCG GTCAACGGGG GGCATGTCCA CCTGAACGGT
CAACGAATTA AAGCCAGCCA TCAGGTTAAG GTTGGGGATC GCCTGGAGAT CACCAAAGGC
CCCGTGCAGT TTGCGCTGGT GATCGAAGGG CTCCATGACA AACGTGGCCC CGCACCCGCA
GCACAGCAGC TCTATTGCGA GTCGGAGGCG AGCAAACAGG CGCGGGTGGC GGTGGCTGAC
CAACAACGTG CCGAGCGCAT CAGCCGTCCC GACTATGGCA GTGCCCGCCC CACCAAACGG
GATCGCCGCG CCATGGACCG GTTAAAAGGG TAG
 
Protein sequence
MSPSNEARLR IDKWLWAARF FKTRALATDA VNGGHVHLNG QRIKASHQVK VGDRLEITKG 
PVQFALVIEG LHDKRGPAPA AQQLYCESEA SKQARVAVAD QQRAERISRP DYGSARPTKR
DRRAMDRLKG