Gene Mmc1_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3669 
Symbol 
ID4481479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4607587 
End bp4608243 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID639724425 
Productsmall GTP-binding protein 
Protein accessionYP_867560 
Protein GI117926943 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA GCAAGTTGGA TACCGGTTTT AATGCTGAAT TTGTTGTCGG TGCGGTTAAA 
CCGGAACAAT ACCCCGATGA CGGCCTGCCG GAGGTCGCCT TTGCGGGCCG CTCCAATGTG
GGCAAGTCAT CGCTGCTGAA TAAATTGTTA AACCGACGTC AATTGGCGCG GGTGAGCAAC
ACACCGGGTC GCACGCGGGA GCTTAATTTT TTCCGCATCA ACCAAGCCTA TTATTATGTA
GATCTGCCCG GTTATGGCTA TGCCAAGGTG GGACGGGGGC AGAGAGAGGT GTGGGATCGG
GGTATTGGTC TCTACTTCAA CAGCCGTCGT GATCTGCGTG CGGTGATTTT GTTGCTGGAC
ATTCGGCGTG GCATGACCGA GCAGGATCAA GCGATGCTGG ATTTTATCTT TAAGATGGGT
CTGCCGGTGC TGCCGGTATT AACCAAAAGC GACAAGCTTA ATGCCAACCC TCGCCGTGAG
GCGATCAAGG CCATGCGCTT AATGGTGGCC GAAAAAGTGC CCCTGGCGGT GGCGCCCTTG
CTGGTGACTT CATCGTCCAA AGGGGATGGT ATTTTGGAAC TACGCCAAAC CCTAGCGACC
CTATTGCAGC GTGAGTTGGG GGTTGGCGAT CCACCCCCGC CTGACCCTTG CCCATAA
 
Protein sequence
MDKSKLDTGF NAEFVVGAVK PEQYPDDGLP EVAFAGRSNV GKSSLLNKLL NRRQLARVSN 
TPGRTRELNF FRINQAYYYV DLPGYGYAKV GRGQREVWDR GIGLYFNSRR DLRAVILLLD
IRRGMTEQDQ AMLDFIFKMG LPVLPVLTKS DKLNANPRRE AIKAMRLMVA EKVPLAVAPL
LVTSSSKGDG ILELRQTLAT LLQRELGVGD PPPPDPCP