Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3668 |
Symbol | |
ID | 4481478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4605863 |
End bp | 4607221 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639724424 |
Product | sun protein |
Protein accession | YP_867559 |
Protein GI | 117926942 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAT CCCATGTTTC AGAACGCACC ATGGCCGCTG CGGCGGTCTC TGCCATGCTC TCTGAGCACC TCCCCTTGGA AACCGCTTTG GAGCAGCAGA TTCACCAGCA GAGCGGTACT TCGCCAGAGA TGCGTGGGCG GGCCCATGAG ATTGTGGTGG GTACCATCCG CCATATGGCG TTGCTGGAGG CAACCCTGAC CCGTTTTATG CAAAAGGATC TCAAGGCCAA ACACCACTAT GTACGGGCGG TGTTGCTGAC GGCTTTGTAT CAAGCGCAAT TTATGCGCAC CCCCATTCAT TCGGCGGTGG ATGAGGCGGT TAAGTTGGTC AAACAACAGC CCCGTGACCA CAATCTTTCT GGGTTTGTGA ATGCGGTGCT GCGGCGCTCC ACCGAGGTTG AACTCTCCAC CACGTGGTCG GCGGTTAAAG ATCCCCTTAA GCGTTTGGCC ACGCGCTACT CTCACCCCCT TTGGCTGGTT AAGCGTTGGG AAAAACGGTT GGGTATGGAG GCCACCGAGG CCCGTCTGGC GGCGGCCAAT GCGCAGGCCC CCTTAACCTT GCGTATTCAC ACCCCCAAGG TCACGGTCGC GGACTATCTG GCGGCGGCCA AACAGGCGGA GATTGAGGTA ACGGTCTGCC CCGAGGCTGA AGAGACGCTG ATGCTGCCCC AAGGGGCCAA GGTGGCGACG CTGCCCGGTT ACAGCAACGG GTGGTTTGCG GTGCAGGATC GTGCAGCGCA GGCGGTGGCG CGTCTGCTGG CCCCCCAGGC GGGGGAGGCT ATTCTGGATG CCTGTGCGGC ACCTGGGGGA AAATCGGCGC ATTTGGTGGC GTTGGGGGGT GCAGGGGTAG TGATTACCGC CCTGGATAGC GCCCAGCAGC GGCTGGAGCG CATGGGGGAA AATATGGCGC GTCTGGGCAT TCGTTCACAG GTTAAGCTGC GCTGTGCCGA TGCCACACAG CCCATCGAGG GTCTGTTTGA CCGTGCGCTG GTGGATGCCC CCTGTACCGG GACGGGGGTG ATCCGGCGGC ATCCTGATAT TAAATGGCGG CGCAACCCCA GCGGTTTGGC GGAGGTGGTC AAGCAGCAGC AGCAGATTTT GCAGTCGGTG GCCGCTGCGG TTAAGCCCGG CGGCTTGCTG GTCTACGCCA CCTGCTCTTT AGAACCCGAT GAGAATGAGC AACAAGTGGC GCGATTCCTG AAAGAGCATC CCCAGTGGAA GCGTCTGCCG TTGGAGGCGG GCATGGCGGG TATTCTCCCC GAGTGGATTG ATTCCGCAGG GGATCTACGC ACCGAACCGG CGACCCATGG GGTGGACGGT TTTTATGCGG CGCGGCTGAT CAAGGATGCC AATCACTGA
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Protein sequence | MSKSHVSERT MAAAAVSAML SEHLPLETAL EQQIHQQSGT SPEMRGRAHE IVVGTIRHMA LLEATLTRFM QKDLKAKHHY VRAVLLTALY QAQFMRTPIH SAVDEAVKLV KQQPRDHNLS GFVNAVLRRS TEVELSTTWS AVKDPLKRLA TRYSHPLWLV KRWEKRLGME ATEARLAAAN AQAPLTLRIH TPKVTVADYL AAAKQAEIEV TVCPEAEETL MLPQGAKVAT LPGYSNGWFA VQDRAAQAVA RLLAPQAGEA ILDACAAPGG KSAHLVALGG AGVVITALDS AQQRLERMGE NMARLGIRSQ VKLRCADATQ PIEGLFDRAL VDAPCTGTGV IRRHPDIKWR RNPSGLAEVV KQQQQILQSV AAAVKPGGLL VYATCSLEPD ENEQQVARFL KEHPQWKRLP LEAGMAGILP EWIDSAGDLR TEPATHGVDG FYAARLIKDA NH
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