| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3647 |
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| Symbol | |
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| ID | 4482358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4585160 |
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| End bp | 4586710 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639724402 |
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| Product | threonine dehydratase |
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| Protein accession | YP_867538 |
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| Protein GI | 117926921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATC TACACTGCCC TTTTATACAA AGGTTGCCCA TGTCCGAACA ACTGTTTCGC
CACATTCTTA CTTCCCGCGT CTACGAGGCT GCGGTGGAGA CCCCTTTGGA ACAGTCGGCT
TGGCTTTCGG CGCAGCTACG CAACCAAGTT TTTATTAAAC GCGAGGATCT ACAGCCTGTC
TTTTCGTTTA AATTACGCGG GGCCTACAAC AAAATGGCGC AGCTTACCCC TGAGCAGCGG
GCCCGGGGCA TTATTGCGGC CTCTGCGGGC AACCATGCGC AAGGGGTGGC CTTTAGCGCC
CGTCAGTTGG GGTTATCTGC CACCATTGTG ATGCCCTGCA CCACCCCAGA GATCAAGGTG
GGGGCGGTCA AACAGTTTGG TGCCCAGGTG GTGCTGCATG GGGATAACTA CTCCATCGCC
GCCGACCACT GTAAAGAGCT GGCTCAGCAC AACGGCATGA CCTTTATTCA CCCCTTTGAC
GATGAGCTGG TGATCGCCGG ACAGGGTACC GTGGGGCTGG AGATTATGCG CCAGAGCGGT
AATCAACTGG ACGCCATTTT TGTTCCGGTC GGCGGCGGGG GGTTGATTGC GGGCATTGCC
ACCTATGTAA AAAATCTGCT ACCGCAGATC CGTATTATTG GCGTAGAACC CACCGATAGC
GATGCCATGG CCCGCGCCCT AGAGGCGGGC AAGATTGTCT CTTTAGACCA AGTGGGCATC
TTTGCCGATG GGGTGGCGGT GCGTGAGGTT GGTACACGCA CCCTGGCGCT GTGTGAACAG
TATGTGGATG AGATGGTGCG GGTCAATGTG GATGAGATCT GTACCGCCAT CAAGTGGACC
TATCAAGCCA CCCGTGCCAT TGTAGAGCCC GCAGGGGCCT TAGCGCTGGC TGGTTTACGC
CGCTATGTGG CGGAAAAAGG CATAACCGGT CAACGCTTGG TGGTCATCAA TAGCGGGGCC
AATATGAACT TTGAGCGGCT CCGTTATGTA ACCGAACGCA CCATGGTTGG GGAGCAACGC
GAGGCGCTGT TTGCCATCAC CATACCTGAA CAGCCCGGTG CTCTACGCCA CTTTTGCCAA
GAGGTGGTGG GGGACCATAA TATTACCGAA TTTAACTACC GTCTATCGGG GCGCGATGCC
GCCCATATCT TTGTGGGCAT TGATCTGCGT GAACCAGCCG AACGACAACT GCTCGCCCAT
CGGTTACAGA GTTTCCACTA TCAATTTGTG GATCTTACCG AAAACGATCT GGCCAAGACC
CACCTGCGTC ATATGGTTGG CGGGCGTTCC CATGTGGTGC AGCATGAGCG TCTTTTGCGT
TTTCGTTTCC CCGAACGGCC CGGTGCCTTG GCCCACTTTC TTACCACCAT GCAGGCGGAT
TGGAACATCT CACTGTTTCA ATACCGACTA CACGGCGGGG AGTATGGTCG GGTGTTGATT
GGTCTGGAGG TGCCCCCTGA GCAACACGAT CAATTGCAAA GCTGCCTAGA TAAGCTGGGT
TTTCGCTATG TAGATGAGAG TGAGAATCCT GCCTATAAGC TGTTTCTCTA G
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| Protein sequence | MEDLHCPFIQ RLPMSEQLFR HILTSRVYEA AVETPLEQSA WLSAQLRNQV FIKREDLQPV
FSFKLRGAYN KMAQLTPEQR ARGIIAASAG NHAQGVAFSA RQLGLSATIV MPCTTPEIKV
GAVKQFGAQV VLHGDNYSIA ADHCKELAQH NGMTFIHPFD DELVIAGQGT VGLEIMRQSG
NQLDAIFVPV GGGGLIAGIA TYVKNLLPQI RIIGVEPTDS DAMARALEAG KIVSLDQVGI
FADGVAVREV GTRTLALCEQ YVDEMVRVNV DEICTAIKWT YQATRAIVEP AGALALAGLR
RYVAEKGITG QRLVVINSGA NMNFERLRYV TERTMVGEQR EALFAITIPE QPGALRHFCQ
EVVGDHNITE FNYRLSGRDA AHIFVGIDLR EPAERQLLAH RLQSFHYQFV DLTENDLAKT
HLRHMVGGRS HVVQHERLLR FRFPERPGAL AHFLTTMQAD WNISLFQYRL HGGEYGRVLI
GLEVPPEQHD QLQSCLDKLG FRYVDESENP AYKLFL
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