Gene Mmc1_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3631 
Symbol 
ID4480531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4562205 
End bp4562717 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content53% 
IMG OID639724380 
ProductNADH-quinone oxidoreductase, E subunit 
Protein accessionYP_867522 
Protein GI117926905 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.574819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TTGCACCAGC GGCCAAGCCC GCTTTTTCCC AAGAGGCTCT CAAAAAGGTT 
GAGACCATCT ATAACCGTTA TCCCGCAGAT AAGCGTCAAT CTGCCCTGCT GCCCGTGTTG
GATCTGGCCC AGCGGGAGTT TGGTGGCTGG CTGTCGCGGG CATCCATGGA CTATGTGGCG
GAGCTGATGG GTCTGGCGCC GATCCGTGTT TATGAGGTGG CCACCTTCTA CACCATGTAC
AACCTCAAGC CCGTGGGTAA ACACCATGTA CAGGTGTGTA CCAACATCTC TTGTTGGCTG
TGTGGGTCGG ATGGCATTGG TGAAGCGGTA AAACAGCGTC TGGAGATTGA GTATGGTCAA
ACCACGGAGG ATGGTAACTT TACCCTCTCC GAAGTGGAGT GCCTGGGGGC TTGTGTCAAT
GCACCCATGT TCCAGATCAA TGACGACTAC TACGAAAATC TGACACCAGA AACAGCGGTT
AAGATTATCG ACGAGCTGGC CAACAAGGCC TAA
 
Protein sequence
MSEIAPAAKP AFSQEALKKV ETIYNRYPAD KRQSALLPVL DLAQREFGGW LSRASMDYVA 
ELMGLAPIRV YEVATFYTMY NLKPVGKHHV QVCTNISCWL CGSDGIGEAV KQRLEIEYGQ
TTEDGNFTLS EVECLGACVN APMFQINDDY YENLTPETAV KIIDELANKA