| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3576 |
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| Symbol | |
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| ID | 4482092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4491327 |
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| End bp | 4494641 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724325 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_867467 |
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| Protein GI | 117926850 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGG AAACCGATGA AAATGATGAA CTATTGGGCA TGTTTGTCCA AGAGGCCGTG
GAACACATCG AAACCATCGA GCCCGACCTT TTGACGCTGG AGGAGCAAGG CGCCGATACG
GACACCGAGG TTATCAATCG CCTGTTCCGT AGCGTCCACT CAATTAAGGG CTCTGCCGGT
TTCTTTGGCT TGACCGCGAT TTCCAAGCTC TCACATATCA TGGAGAACTT GCTTGGTAAG
GTGCGTGAAC GCGCCATTGT CGCCTCGCCA GCGGTCTCTG ACAGTCTGCT GTCTGGCCTG
GATAAACTCC AGACCATGAT TAATGACGTC TCCAATAGTG AAAAGGTGGA TGCCACCGAG
CAGATCAATG CGATCCAGTC CATCCTGGAT CATCATGAGA GTGGGGCATC CGGTCCTCCG
CCCACCCCAG TAGCCGCCCC AGCAGAAGCG GCCCCTGCGC CGGAGCCCGT GCACGAAGAT
GCGCCCGCCG CTGAAGAAGC CTCCACAGAC CCGGCGGGCC ATGTTGCTGC GCGTTTTGAT
TTGGCATCCT ATGCCGAGGA TGTGGGCCAT GCGATCCAGC ATGGGCAGAA GTTTTTCACC
CTACAGCTAG AAACCGAAGG CACGGCCAAG GATAAAAAGA CCGCTTTTGA CAATCTGCAA
TCGTTGCTCG CCTCTGTGGG TAAGGTGGTT GACACCTCAC CCAAAGTGAG CAGTGGTGAT
TTTTCAGCCG TGGGTCACTA CCTGGATATT TTTATTGCCA CGGTGCTGGA AAAGGATCTG
CTCCAGTCCT TAATCCAGAT CCCCATGGAA AAGATAACCA ATACGCCGAT TCCCGATCAT
TTGGCGAAAA GCGCCAAGTC ACAAAAGGCC TCCGCGCCAG CGGCTGAGCC CCATCACGAT
GAGCACCCTG CTGCGCCCCC TCCGCCGCCA CCGCCCATGG CTAACCCGAT GGATCTTGAT
ATGGACATGG GTATGGCAGA TATGGGCTCT AACCGTGGTA AGCCTGCCCT GCGTAAGCCG
CAACAAGGCA ATGCCAAAGG TAAAGGGAGC GAGAGTGCTA AAGCACAAAG TGCCAGTGGG
GGTGTTCCCT CTGTCGAAGA GACCCTGCGG GTTAGTGTCT CTCTGCTGGA TGAACTGATT
AACAACGCCG GTGAATTGGT GCTGGCACGT AACCAGTTGG TCCGTGCCAG TGCGGATGTG
GCGACTCAGT TTCCCAACTT TACCTCGTTG GTGCAGAATC TTGATTCTAT TACCAGCCGT
ATTCAAGAAC GGGTCATGCA GGCGCGTATG CAGCCTGTGA GCGTTGTGTT TAACAAGTTC
CCACGTATTA TTCGGGATTT GGCCCGTAAG CTGAACAAAA AAATCGATCT GGAAATTCGC
GGTGGTGAGG TTGATCTGGA TAAGTCGGTC ATTGAACACC TCTCCGATCC TTTGACCCAC
ATGATTCGTA ACGTGGCCGA CCACGGTATC GAGGAACCCG ATGCGCGCGT GGCCGTGGGT
AAACCCGATG CGGGTCAGGT TGAGCTGGCG GCGTACCATG AAAACGGTAT GGTGAATATC
TCTCTCTCCG ATGATGGGGC CGGTATTGAT GCGGTACGCA TCAAGGCCAA GGCGATGGAG
AAGGGTCTGA TTACCGAACG CCAAGCGGAC ACCATGCCAG AGGAGGAGGC GCTGGGGCTG
ATCTTTGCTC CGGGCTTTTC CATGGCTAAA AAGATCTCTG ATGTGTCGGG TCGTGGCGTG
GGCATGGACG TGGTGCGTAC CAACATTGAA AAGTTGGGGG GTACGGTACA CATTGAGTCC
AAGGTTGGTA AGGGCACCCG CATTATCTTA AAGCTACCGC TCACCTTGGC GATCATTCCT
GCCATGATTG TCTCGGCGGG CAAACAGCGG TTTGCAATTC CTGAGATCGG CTTGGTTGAG
ATTGTGCGGG TGGCGGAATC TGACCGCGCC AACCAAATTG AGGTTGTGGG TAATGCCCCG
GTATTGCGTT TACGCAATAT GCTCTTGCCG CTGGTGGATT TAGCAGATGT ACTGGGTATT
CAACGTGTAT GGCCACCGGA GTCTGAGTCA CCAGAGCGTC GCCAAAATCT TCATGAGCGT
CGTTCTGTGC GGACAGACGG GAAGAGTGAA CCGGCGGCTG AGACCAAGAA GAGTGCTGCC
CGTCGGGATA GCAGTGATCG TCGTGCACCT GGTGGTTTGG TGGCCTACAT TATGGTGTTG
AATGTGGGCG GTAACGAGTT TGGTATGGTG GTGGATGAGG TGTTGGATAG TGAAGAGATT
GTGGTGAAGC CACTGCCCTC CTTCTTCAAA GACAACCCCT GTTTCTCGGC CACCACCATC
CTTGGTGATG GTACGGTATC GTTGATTATT GACTATGCTG GGGTGATGGA GCAGGCCAAC
ATCAACTTTA GCAATGTTGA GCGTGCCAGC CGCATGGACC TTGATGATGA GCGCCGTGCC
GCACTGCGTG AAAAACAGAA TATTATTCTG CTTGAGACGG AGACCGGTCT CTTGATGGGC
ATTGTGCACA GCATGGTGCG ACGGGTTGAA AAAATTCCGC CCAATTTGCT GGATAATATT
GGTGGCCTGC CCTACGTACG TTATGACGGT AAAACCTTCC GAGCGGTTTA CCCTGACCAA
GTACTGGGGT TGGAAGGAAT GAGTATGTCT ATGGGTTATG CCTCTGACTC CGTAGGCGGC
GAAGAGGATG ACAATCTCTG TATGGTGGTG CCTAACATCC CAGACATGCA GGCAGGATTG
ATCTTTAAAC GCATCATCGA TACCCGCGAA ACGGCTATTG ATCTGGATTG CCGCGCCATT
CGTGCCGAAG GGCTATTTGG TTCTGCGCAG ATTGATGATC GTGTGGTGCT GTTCCCAGAT
GTTAACTTGG TATTTGATAT TGCGGGTATC TCTTCGCCCC ATCCGCCGCC CCAAGTCAAT
GGCACCGGGC TGCGGGCATT GGTGGTGGAT GATACCCCCT TCTTGCGGGC TTTAACGGCC
AGTTATCTGA CCGGTGCGGG TTTCTATGTC GACCAGGCTG AGGATGGTAC ATCCGCGCTA
AAACGCCTTA AAGAAGAGGT TTTTGATCTG CTTGTCACCG ATTTAAATAT GCCGCTTATG
GATGGCTTTG AACTGGCTAT TGAGGTTGCG GGAACCCCCA TGTCGGAGAT TCCGATCATT
GCGACCACAT CGTCCATCTC TTCTGATCTG GAGCAACGTT GCGCCCGAGC TGGTTTTGTC
AGTTGTGTGC CAACTATTGA TAAGAATCGT CTCCTCTCCG TGGTTGCGAC GTTGCAGACG
GAAGAGCTTT ATTGA
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| Protein sequence | MNMETDENDE LLGMFVQEAV EHIETIEPDL LTLEEQGADT DTEVINRLFR SVHSIKGSAG
FFGLTAISKL SHIMENLLGK VRERAIVASP AVSDSLLSGL DKLQTMINDV SNSEKVDATE
QINAIQSILD HHESGASGPP PTPVAAPAEA APAPEPVHED APAAEEASTD PAGHVAARFD
LASYAEDVGH AIQHGQKFFT LQLETEGTAK DKKTAFDNLQ SLLASVGKVV DTSPKVSSGD
FSAVGHYLDI FIATVLEKDL LQSLIQIPME KITNTPIPDH LAKSAKSQKA SAPAAEPHHD
EHPAAPPPPP PPMANPMDLD MDMGMADMGS NRGKPALRKP QQGNAKGKGS ESAKAQSASG
GVPSVEETLR VSVSLLDELI NNAGELVLAR NQLVRASADV ATQFPNFTSL VQNLDSITSR
IQERVMQARM QPVSVVFNKF PRIIRDLARK LNKKIDLEIR GGEVDLDKSV IEHLSDPLTH
MIRNVADHGI EEPDARVAVG KPDAGQVELA AYHENGMVNI SLSDDGAGID AVRIKAKAME
KGLITERQAD TMPEEEALGL IFAPGFSMAK KISDVSGRGV GMDVVRTNIE KLGGTVHIES
KVGKGTRIIL KLPLTLAIIP AMIVSAGKQR FAIPEIGLVE IVRVAESDRA NQIEVVGNAP
VLRLRNMLLP LVDLADVLGI QRVWPPESES PERRQNLHER RSVRTDGKSE PAAETKKSAA
RRDSSDRRAP GGLVAYIMVL NVGGNEFGMV VDEVLDSEEI VVKPLPSFFK DNPCFSATTI
LGDGTVSLII DYAGVMEQAN INFSNVERAS RMDLDDERRA ALREKQNIIL LETETGLLMG
IVHSMVRRVE KIPPNLLDNI GGLPYVRYDG KTFRAVYPDQ VLGLEGMSMS MGYASDSVGG
EEDDNLCMVV PNIPDMQAGL IFKRIIDTRE TAIDLDCRAI RAEGLFGSAQ IDDRVVLFPD
VNLVFDIAGI SSPHPPPQVN GTGLRALVVD DTPFLRALTA SYLTGAGFYV DQAEDGTSAL
KRLKEEVFDL LVTDLNMPLM DGFELAIEVA GTPMSEIPII ATTSSISSDL EQRCARAGFV
SCVPTIDKNR LLSVVATLQT EELY
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