Gene Mmc1_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3558 
SymbolfadE 
ID4482513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4467745 
End bp4470081 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content59% 
IMG OID639724307 
Productacyl-CoA dehydrogenase 
Protein accessionYP_867449 
Protein GI117926832 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTAT GGCTTGTGGT AATACCGCTG CTCACGCTAT TTCTGGTGAT CAGCCTACCG 
ATGTTAAGAC GTCGTTTGCT GTCGGGACCC ATCATGGCGT TGATGCAAGG TGCCATGCCG
CCCCTTTCCC AGACCGAGCG CGAGGCGCTG GAGAGCGGCA CCGTTTGGTG GGAGCGGGAG
CTCTTTTCTG GGCGGCCCGA TTGGTCCAAG TTGCAAAATC TGCCCGCAGA CACCTTGAGT
AAGGAGGAGC AAGCCTTTCT GGAGGGTCCA GTCCAGCGGC TCTGCGCCCG TTTGGATGAG
TGGCGTATTA AGCAAGAGGA GCACGACCTG CCCGCCGACC TCTGGGAGAT GCTTAAACAA
GAGGGCTTTT TTGGCATGAT TATCCCCCGA GAATATGGGG GATTGGGCTT CTCGGCGCGG
GGTCATTCGG CGGTGATCAC CAAGATTGCC AGCCGCAGTG TTACCGCAGC GGTAACGGTG
ATGGTGCCCA ACTCATTGGG ACCGGCGGAA CTGCTGATGC GCTATGGTAC CCCTGAACAG
CAGCGTTACT ATCTACCCCG TTTGGCCAAT GGGCGCGAGA TCCCCTGTTT TGCCCTTACC
AGCCCACGGG CCGGTAGCGA TGCGGGGGCG ATTCCAGATA CCGGTGTGGT ATGTCGGGGT
AACTTCCGGG GTGAGACGGT GGTGGGTATC CGCCTCAATT GGGATAAACG CTACATCACC
CTAGCACCGG TGGCCACCCT ATTGGGGCTG GCTTTTCGGC TCTATGATCC AGATAACATA
ATGGGCAATA TACGGGATCT GGGGATAACT CTGGCATTAA TTCCCACCCA AACCGCCGGT
GTCTCCATTG GCACCCGGCA TGACCCCCTG GGGGTTCCTT TCCTCACCGG TCCGACCCGT
GGTCACCAAG TTTTTATCCC CATGAGCTAT TTAATTGGCG GCGAGCAGGG CATTGGCCAG
GGTTGGCGAA TGTTGATGGC GTGCCTCTCT GAAGGGCGGG GTATCTCATT GCCTGCGCTC
AGTGTGGGTG CGGCCAAGCT GGCGGCGCGT AGCAGTGGCA ACTATAGCCG GGTGCGCAAA
CAGTTTGGGC TCGCCATAGG CCGGTTTGAA GGGGTACAAG AGGCGCTGGG CCGGATTGGT
CTGAACGCCT ATCGTATGGA GTCTGCCCGC ACTCTGACCG TAACCATACT AGACCAAGGT
GAGCGCCCCA GTGTGGCGGC GGGTATTGTT AAGTATCACC TAACCGAAGG GATGCGCCAG
ACCATCAATG ATGCCATGGA TATATGGGGG GGTACCGCCA TCTGTCGGGG TCCCCATAAT
TTACTGGCGC ACGCCTATCA GGCTATTCCC ATCGGCATCA CCGTGGAGGG GGCCAATATC
CTGACCCGTA CCATGATGAT CTTTGGACAA GGGGCCATTC GTGCCCACCC CTACCTGTTG
CAAGAGATGG AAGCGGTCAC GGGGCAACAG CCGGTGGCAG AGCGAGTCAT TGCCTTTGAC
CGGCTATTAT GGGCGCATGT GGGTTACACC ATGATGAATG GTCTGCGGGC TCTGGTTTAT
GGGCTGTTGG GGAACGCTGG TGCCGCAGCC CCACAAGGGG TGTGCGCTAC CGAACGCAAG
TGTTACCAAC GCATTAGCCA TTGGAGTGCC GCCTTTGCTT TTATGTCGGA CCTCGCCCTG
GCGCGGTTGG GGGGGTCTCT CAAACGGCGT GAATCACTGT CGGCGCTGTT GGGGGATGCT
TTGAGCCATC TTTACATGGC CAGTGCGATT CTGCATCGCT ACAGCAAGGA TGGTTCCCCG
CCCCAGGATC GCCCCATCAT GGAGGCCGCC CTAGAGGATA GCCTATTGCA GGTGCGTCAA
GCGCTGGTGG AGGTGGTGCG TAACTTCCCC GATCCTGTGG TGGCGCTGCT CATGCGTCTG
GTGGTGTTCC CCACCGGTTT AGCCCAACGC CGTTTGCCCC AACACCATTT ACACCGGGTG
GCAATCCTGA TGCAGCAGAG CGGTCCGGCG CGTGAGCGGC TGACGGCGGG GATCTATCTG
GGTGGCGGGG ATGAAGGGGA TTCCATGGCT GAGTTAGAGG CGGCCTTTAT CGCCACCGAA
CGCAGTGACG AAGCTGAGAA ACGCTTGATC CAGTGGATGA AGTCCCGACG TTGGGATCCC
ATCCTCAGCA ACGGCATGCA TGTACCGGAA GGGTATCTGC AAAGCGCCGT GCAGGAGGGG
GTGATCTCGG AACTGGAGGC CAAACAGTTG GATGATACCC TAGAGCGCCG TATGCGGGTG
GTGCGGGTGG ATGAGTTTCC AGCGGTCTGT TGGTTGGGAG AGGAGGTGGC AGCATGA
 
Protein sequence
MWLWLVVIPL LTLFLVISLP MLRRRLLSGP IMALMQGAMP PLSQTEREAL ESGTVWWERE 
LFSGRPDWSK LQNLPADTLS KEEQAFLEGP VQRLCARLDE WRIKQEEHDL PADLWEMLKQ
EGFFGMIIPR EYGGLGFSAR GHSAVITKIA SRSVTAAVTV MVPNSLGPAE LLMRYGTPEQ
QRYYLPRLAN GREIPCFALT SPRAGSDAGA IPDTGVVCRG NFRGETVVGI RLNWDKRYIT
LAPVATLLGL AFRLYDPDNI MGNIRDLGIT LALIPTQTAG VSIGTRHDPL GVPFLTGPTR
GHQVFIPMSY LIGGEQGIGQ GWRMLMACLS EGRGISLPAL SVGAAKLAAR SSGNYSRVRK
QFGLAIGRFE GVQEALGRIG LNAYRMESAR TLTVTILDQG ERPSVAAGIV KYHLTEGMRQ
TINDAMDIWG GTAICRGPHN LLAHAYQAIP IGITVEGANI LTRTMMIFGQ GAIRAHPYLL
QEMEAVTGQQ PVAERVIAFD RLLWAHVGYT MMNGLRALVY GLLGNAGAAA PQGVCATERK
CYQRISHWSA AFAFMSDLAL ARLGGSLKRR ESLSALLGDA LSHLYMASAI LHRYSKDGSP
PQDRPIMEAA LEDSLLQVRQ ALVEVVRNFP DPVVALLMRL VVFPTGLAQR RLPQHHLHRV
AILMQQSGPA RERLTAGIYL GGGDEGDSMA ELEAAFIATE RSDEAEKRLI QWMKSRRWDP
ILSNGMHVPE GYLQSAVQEG VISELEAKQL DDTLERRMRV VRVDEFPAVC WLGEEVAA