| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3537 |
|---|
| Symbol | |
|---|
| ID | 4480388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4437544 |
|---|
| End bp | 4438617 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639724286 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_867428 |
|---|
| Protein GI | 117926811 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCAC GCAAAATTAT CCATATCGAT ATGGATGCCT TCTTCGCATC CGTAGAACAA
CGCGACTTCC CCCACCTACA AGGTAAACCC GTGGTAGTAG GCGGCCTAGG CCCCCGCGCC
GTAGTGGCCG CCGCCAGCTA CGAAGCTCGC CAATTCGGTA TCCACTCCGC TATGCCCATG
GGACGCGCGA AAAACCTGTG CGACCAACTC ATCATCCAAC CAGGCCGTAT GCAAACCTAC
AAAAATGAAT CCCACCACAT CCATGCCATC TTTCAACGCT ACACCAACCT CATCGAACCC
CTCTCCCTAG ATGAAGCCTA CCTGGACGTC ACAGAAAATT TTCTAAACCT CAATTCCGCA
ACCCAAATCG CCCAACAGAT CAAAACCGCA ATCTGGGAAG AGACCCATCT CACCGCCTCC
GCCGGAATAT CCGTCAATAA AATGCTGGCA AAAATCGCCT CCGCTATGAA TAAACCCAAT
GGCCTAACCC TTATTCGACC CGAACAAGCC GCCCAATTTA TCGACACCCT ACCCGTTAAA
CGCTTTCACG GTATCGGCCA ACGTACCGCC GAACGCATGC TGCAATTGGG TATCGAAACC
GGCGCACACC TGCGCCAATG GGACCGCATA ACGCTGATTA AATGGTTCGG TAAAGCCGGT
GGTTTCTATC ACGAGCTGGC CCACAATATC GATAACCGCC CCGTTAACCC CAACCGAGAA
CGTAAATCCG TCGGTGCTGA ACACACCTTT GACCAAGATA TTTTTGCCAA ACCCCTCATG
CAACAAGCAC TCAATACCAT CCTTGCCGAA CTGTGGAACC GCTTAGATCA ACTTCAACTG
CGCGGCTCAA CCCTGACCCT AAAAATTAAA TTTGCCGATT TTCAACAAAT CACCCGCGCC
CATACCGCAC AACAGATTAT CTCTACCCAA GCCGAAGCCG CCCGCATTAT CACCGCCCTA
CTGCAACGCG AACCCCTCTA TGATCGGGGT GTACGTCTAC TGGGTATCAG CATGGGCCAT
CTTTGCTCCA GTCAAACAGC CACCACCCAA CCCCAACAAC TGAGCCTGTT CTAG
|
|---|
| Protein sequence | MAPRKIIHID MDAFFASVEQ RDFPHLQGKP VVVGGLGPRA VVAAASYEAR QFGIHSAMPM
GRAKNLCDQL IIQPGRMQTY KNESHHIHAI FQRYTNLIEP LSLDEAYLDV TENFLNLNSA
TQIAQQIKTA IWEETHLTAS AGISVNKMLA KIASAMNKPN GLTLIRPEQA AQFIDTLPVK
RFHGIGQRTA ERMLQLGIET GAHLRQWDRI TLIKWFGKAG GFYHELAHNI DNRPVNPNRE
RKSVGAEHTF DQDIFAKPLM QQALNTILAE LWNRLDQLQL RGSTLTLKIK FADFQQITRA
HTAQQIISTQ AEAARIITAL LQREPLYDRG VRLLGISMGH LCSSQTATTQ PQQLSLF
|
|---|
| |