| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3514 |
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| Symbol | |
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| ID | 4481112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4391422 |
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| End bp | 4393377 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724263 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_867405 |
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| Protein GI | 117926788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.482546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAAC AGGTATCCCA TTCGTTATTG AATGAAATTA TGCTTGAGTT GGACCCGGAG
ATCCTCAAGC AAAATCAAAT GCGCTATTTT TATACCCGCT TAGGTGCAAA TTTTTATGCC
ATTCACTCCA TTGCCAAGGT GCTGTATGGC AACCGGAATG ATTTTAATGA GCAGATGAAG
CGGTTGGTGG AGACCATGGC GCGGCAGTAT ATTGCGCGTC CGGCCCAGTA TAGGGAGTCT
GATCTGGAGC GTGAAAAGGA CCACACTTGG TTTTTGCATC AGCAGTGGGT GGGTATGGCG
CTCTACAGTG ATGGTTTTGC CAACGATCTA CAGGGTTTAA ATACCAAGCT TAGCTATTTG
CAAGAGCTGG GTATTAACAT GATCCATATT ATGCCCCTGC TGGATTGCCC GCCGAATAAG
AGTGATGGGG GTTATGCCAT ACGGGATTTT CGTAAGATTG ATAGCCGTGC TGGCACATTG
GAGGATATAA CCACGCTTGC GGATTCCATG CATACGCGGG GGATGTTATT GACGTTAGAT
GTGGTGCTCA ACCACACCTC GGACGAACAC GAGTGGGCTA GGCGGGCCCG TGAGGGGGAT
TCTGACTATC AGAACTATTT TTATGTATTT AAAGATAGGA GCATGCCGGA TCTGTTTGAA
GAGTCCATGG TGGAGATTTT TCCCCAGACC GCGCCGGGTA ATTTTACCTG GAGCGAAGAG
ATGGGCCGGT GGGTGATGAC CTCTTTTAAC AGTTATCAGT GGGATTTAAA CTACAGCAAC
CCATCGGTAC TGATTGAAAT TTTGGATATT ATTCTCTACT GGGCCAATCT AGGGGCGGAT
ATTATGCGCT TGGATGCGGT GGCCTTTTTA TGGAAAAAAA TAGGCAGCAC CTGTCAAAAC
CAACGGGAGG CGCACCTGAT ACTGCAACTG CTCAAGGATT GCTGTCAGGT GACGGCACCG
GGGGTATTGT TTATTGCTGA GGCGATTGTC TCCCCCTTGG AGATTACCAA GTATTTTGGT
GAGGATGCCA TCAACGCCAA GGAGTGTGAG ATTGCCTATA ATGCCACTCT CATGGCGCTA
TTGTGGGATG CCATCGCGAC GAAAAAGGCG GAGCTTTTGT ATCGGGGTAT TAAGAGTTTG
CCGGATAAGT TGGAGCGGGC CACATGGTTG AACTATATCC GCTGTCATGA CGACATTGGT
TTGGGTTTTG ATGACACGGA TATTCGTCAG GCAGGTTATG AGCCGTTTGC TCACCGTCGT
TTTTTGGTGG ATTATTTTAC GGGGGGTTAC ACGGACTCTC CAGCGCGGGG CAGGCCGTTT
GGGCAGAATG ATAAGACGGG GGATGCCCGT ATTTCAGGCA CATTAGCCTC GTTAGCGGGT
TTGGAGAGTG CCCTTTACGA AGGCAATGAG GAGGCGGTGC ATACCTCTAT CCAAATGATT
CTGTTGTTGC ACAGTGTGAT TCTTTCCTTT GGGGGGATTC CGCTGCTCTA TTATGGTGAT
GAGTTGGGCA CCTTGAACGA CTATAGCTAT GAGCAGCAAG AGAGTAAGCG GGAAGATAGC
CGGTGGATTC ATCGGCCAAC CATTGATTGG GATAAGGCGG AGCTGCGCAA TCAGCCGGGT
AGTGTGGAGT ATCGTCTTTT TAATGCGTTA AAAAAGATGA TTGCGGTGCG CAAGGAGATC
CCGGCGTTTG CGGATTTTAA CAACCGTGAG ATGTTAGATT TGGGCAATCC GCATCTGTTG
GCCTATGCAC GGTTTGATTT TATGCATGCT TCGGCCAAGG TATTGGTGAT CTGTAATTTT
GATTTAAAGC CGCAGTATGT GGAGTTGGAG CAGCTTAGGC AGTTGGGCTT TTTAAAGAGC
CATAATTTGC GGGACGCCTC GACGGGGGAG AGTCCGCAAC GGTTTAACGA TCAATTGGCA
ATTCCGGCCT ATGGGTTTTA TTGGCTGATG GAGTGA
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| Protein sequence | MYEQVSHSLL NEIMLELDPE ILKQNQMRYF YTRLGANFYA IHSIAKVLYG NRNDFNEQMK
RLVETMARQY IARPAQYRES DLEREKDHTW FLHQQWVGMA LYSDGFANDL QGLNTKLSYL
QELGINMIHI MPLLDCPPNK SDGGYAIRDF RKIDSRAGTL EDITTLADSM HTRGMLLTLD
VVLNHTSDEH EWARRAREGD SDYQNYFYVF KDRSMPDLFE ESMVEIFPQT APGNFTWSEE
MGRWVMTSFN SYQWDLNYSN PSVLIEILDI ILYWANLGAD IMRLDAVAFL WKKIGSTCQN
QREAHLILQL LKDCCQVTAP GVLFIAEAIV SPLEITKYFG EDAINAKECE IAYNATLMAL
LWDAIATKKA ELLYRGIKSL PDKLERATWL NYIRCHDDIG LGFDDTDIRQ AGYEPFAHRR
FLVDYFTGGY TDSPARGRPF GQNDKTGDAR ISGTLASLAG LESALYEGNE EAVHTSIQMI
LLLHSVILSF GGIPLLYYGD ELGTLNDYSY EQQESKREDS RWIHRPTIDW DKAELRNQPG
SVEYRLFNAL KKMIAVRKEI PAFADFNNRE MLDLGNPHLL AYARFDFMHA SAKVLVICNF
DLKPQYVELE QLRQLGFLKS HNLRDASTGE SPQRFNDQLA IPAYGFYWLM E
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