Gene Mmc1_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3493 
Symbol 
ID4483020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4364227 
End bp4364910 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID639724241 
Productputative lipid carrier protein-like protein 
Protein accessionYP_867384 
Protein GI117926767 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTCA AGCAATTTGC CGCACCTTTA GCCCTGCTTC CCCAACCCTT TACCGCCGTG 
GGCCTGGGGG TAACGCTCAA TCTGTTTTTT ATGCGTTATC CCGAACTCAA AGCACGCCTG
CAAGAGCTGG CTGGTAAGCT GTTTCATTTT GCGGTGGAGG ATCTGGGCCA GGACTACTAC
ATGTTGGTGG AACAGGATGG TCATGTGCGC ATCCACACCT ACAGCGACGC CCCGGTGAAT
GTCACCATGA GCGGCAGTGC CGAGGCCTTT TTGCAACTCC TGTTTAATGT GGAAGATCCC
GACTCGCTCT TTTTCGCCCG TCGTCTAAAA ATGAGCGGCG AGACCGAGAC CGGCCTACAC
TTTAAAAACA TTCTGGATAA TGTTGCGATT GATTGGGAGC GTGAGGCGGC CTTTTTTATT
GGTCCCATAG GCGCCAAGCT GGCCGGTGGA GTTGGCAGCC GTCTCAAAGC GCTGTTTGCC
ATGCAAAAGG AGTCGGCAGA AGAGAGTGCG GAGATGTGGC TGGATGAAAA CAGCGTACCC
CGACGCCATG ATGTGGATGA TTTGCAGGAT CAGTGTAGCG ACCTAAGTGG CGAAACCGAG
AGTCTGGAGC GCCGCCTCAC CCGTTTGGAA AACCGTTATA AGATGCGCCA AGCGGCCCTA
CGCGCGGCGG ATTCGGAAGC CTAA
 
Protein sequence
MFVKQFAAPL ALLPQPFTAV GLGVTLNLFF MRYPELKARL QELAGKLFHF AVEDLGQDYY 
MLVEQDGHVR IHTYSDAPVN VTMSGSAEAF LQLLFNVEDP DSLFFARRLK MSGETETGLH
FKNILDNVAI DWEREAAFFI GPIGAKLAGG VGSRLKALFA MQKESAEESA EMWLDENSVP
RRHDVDDLQD QCSDLSGETE SLERRLTRLE NRYKMRQAAL RAADSEA