Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3463 |
Symbol | |
ID | 4482819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4324092 |
End bp | 4324727 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639724211 |
Product | translation factor SUA5 |
Protein accession | YP_867354 |
Protein GI | 117926737 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0993793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCA CCGCCCCGCT CTATCCCAGC GAACAGTTGC GCCACGCGGT GCAGCTGCTG GAGGGGGGCG GTATCCTCGC TTATCCCACG GAGACCCTCT ACGGCTTGGG GGTTGATCCC TTTAACCCCC AAGCCGTGCG TCGATTGCTG GACCTAAAAG GGCGTGAGGC CAAAAAGGGC CTCATCCTGT TGGTCCCAAA CAGCGTGGCA TTGCTGCCTT TGGTGCAGCC CCTTGAGGCC GTTGCGCAGC GTCTAATCGA ACATTTTTGG CCCGCCCCTC TGACCTTAGT GCTGCCAGCC CAAGCGGGCC TGAGTAGCCT GCTGACTGGT GGTACCGGAC TGGTAGCGGT GCGCCATTCA AGCTCCCCTT ATGTGCAGGC GCTGATGGCA CATTGGCAGC GGCCTTTGGT TTCTACCAGT GCCAACCCCA GTGGCTCTCA AGTGCAACAC TGGTCGCCTG AGCGCATCGC CGCAGAGTGG GGGGGGCAGG TTGATATGAT CCTCGCTGGA CCCTATGATG ATGGGGCCTT GGCTTCGACG GTGGTAAAGG TTATAGCGGG ACGTGGGGTT GTACTGCGCG AGGGTGCCAT CACGTGTGCC CAGTTACAGC AGATTATTCC AATTGAGGCG GTTTAG
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Protein sequence | MITTAPLYPS EQLRHAVQLL EGGGILAYPT ETLYGLGVDP FNPQAVRRLL DLKGREAKKG LILLVPNSVA LLPLVQPLEA VAQRLIEHFW PAPLTLVLPA QAGLSSLLTG GTGLVAVRHS SSPYVQALMA HWQRPLVSTS ANPSGSQVQH WSPERIAAEW GGQVDMILAG PYDDGALAST VVKVIAGRGV VLREGAITCA QLQQIIPIEA V
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