Gene Mmc1_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3463 
Symbol 
ID4482819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4324092 
End bp4324727 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID639724211 
Producttranslation factor SUA5 
Protein accessionYP_867354 
Protein GI117926737 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0993793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA CCGCCCCGCT CTATCCCAGC GAACAGTTGC GCCACGCGGT GCAGCTGCTG 
GAGGGGGGCG GTATCCTCGC TTATCCCACG GAGACCCTCT ACGGCTTGGG GGTTGATCCC
TTTAACCCCC AAGCCGTGCG TCGATTGCTG GACCTAAAAG GGCGTGAGGC CAAAAAGGGC
CTCATCCTGT TGGTCCCAAA CAGCGTGGCA TTGCTGCCTT TGGTGCAGCC CCTTGAGGCC
GTTGCGCAGC GTCTAATCGA ACATTTTTGG CCCGCCCCTC TGACCTTAGT GCTGCCAGCC
CAAGCGGGCC TGAGTAGCCT GCTGACTGGT GGTACCGGAC TGGTAGCGGT GCGCCATTCA
AGCTCCCCTT ATGTGCAGGC GCTGATGGCA CATTGGCAGC GGCCTTTGGT TTCTACCAGT
GCCAACCCCA GTGGCTCTCA AGTGCAACAC TGGTCGCCTG AGCGCATCGC CGCAGAGTGG
GGGGGGCAGG TTGATATGAT CCTCGCTGGA CCCTATGATG ATGGGGCCTT GGCTTCGACG
GTGGTAAAGG TTATAGCGGG ACGTGGGGTT GTACTGCGCG AGGGTGCCAT CACGTGTGCC
CAGTTACAGC AGATTATTCC AATTGAGGCG GTTTAG
 
Protein sequence
MITTAPLYPS EQLRHAVQLL EGGGILAYPT ETLYGLGVDP FNPQAVRRLL DLKGREAKKG 
LILLVPNSVA LLPLVQPLEA VAQRLIEHFW PAPLTLVLPA QAGLSSLLTG GTGLVAVRHS
SSPYVQALMA HWQRPLVSTS ANPSGSQVQH WSPERIAAEW GGQVDMILAG PYDDGALAST
VVKVIAGRGV VLREGAITCA QLQQIIPIEA V