Gene Mmc1_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3457 
Symbol 
ID4482813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4318469 
End bp4318882 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content54% 
IMG OID639724205 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_867348 
Protein GI117926731 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGA CTGTTGATCT TGAGGTGGTA ACACCTGAGA AACTGATTCT CTCCGAAACG 
GTGCAACTGG TGACTGTTCC GGGTAGCGAA GGCTATTTTG GGGTTTTAAG CGGTCACGTT
CCCATGATTT CCTCGCTGCG CAGTGGTGTT GTGCGCATGG GGCAGGGGGA TGATGCGGTG
CATCTGGCCG TTTCTAAGGG GTTTGCCGAG GTTCGTCCAG ATCGGGTAAC GCTACTGGTT
GACCGTGCGG TATTTGGCAA AAAAGTGGAC GCCGCCGCGG TGACAAAAAT TCGTGATGCC
GCCCAGGATG AGTTGGATGG TACCCCGACA GAGAGCGAAG AGTATGAGAC TTTGCGTGAT
AAGTTAGACT TTGCCAATGC GCAGTTGGCC GCCCTTGAGG GTGAGCTTGT TTAA
 
Protein sequence
MGVTVDLEVV TPEKLILSET VQLVTVPGSE GYFGVLSGHV PMISSLRSGV VRMGQGDDAV 
HLAVSKGFAE VRPDRVTLLV DRAVFGKKVD AAAVTKIRDA AQDELDGTPT ESEEYETLRD
KLDFANAQLA ALEGELV