Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3428 |
Symbol | |
ID | 4483880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4280352 |
End bp | 4281275 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639724177 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_867320 |
Protein GI | 117926703 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TATTAGCGGA ACCACGGGGA TTTTGTGCCG GGGTTGATCG GGCCATTGCC ATTGTACTCA AAGCGCTGGA AAAATTTGGC CCGCCCATCT ATGTCCGCCA TGAAATTGTG CATAACCGCT GGGTGGTGGA GCATCTACGC AACCAGGGTG CGGTGTTTGT GCATGAGTTG GATGAAATCC CCGATGGTGC GGTAGCCATC TACTCCGCCC ATGGTGTCTC TAAAGCGGTA CAAGCCGAGG GCGAGCGCCG TCCGTTGCAC ATTTTGGATG CCACCTGCCC ACTGGTCGAC AAGGTCCACC GCGAGGCCGA ACGCCTGGAT CATGACCACT ACCAAGTGCT GCTCATCGGC CATGCCGGGC ACCCCGAGGT TGAGGGTACC ATGGGCCAAC TGCAACAGGC GCGCATGAAA CTGATCTCCC ATCCCGATGA CGTTGCACAG TTGCGGCTAA GTAACCCGCA AAAGGTGGCC TACATTACCC AAACCACCCT CTCGGTGGAT GAGACCCGAG CGATGGTGGC GCAACTTAAA GCCCGTTTTC CCACCATCAA AGAACCGGCT AAAGAGGATA TCTGTTATGC GACCCAAAAC CGCCAAAATG CGGTCAAAGC ATTGGCGCAA GCATCGGATC TTATTCTTGT TTTAGGGGCA CCAAACAGCA GCAACTCAAA CCGTTTACGC GAGGTGGCCG AACAGCACGG CTGCCGGGCT TTCCTGATTG AAAACGCCAA AGATGTGGAA ATACAGTGGC TTGAAGGGGT TGAGACCCTG GGCATTACCG CCGGGGCTTC GGCACCGGAA ATCTTAGTCG AAGAGCTGCT GGCGCATTTG CACGCAGAGC AGCACCAGGT GGAACTGCTC TCGGTCACCA AAGAGTATTT GGCCTTTCCA CTGCCCTTAG AACTGCGGGA GTAA
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Protein sequence | MRILLAEPRG FCAGVDRAIA IVLKALEKFG PPIYVRHEIV HNRWVVEHLR NQGAVFVHEL DEIPDGAVAI YSAHGVSKAV QAEGERRPLH ILDATCPLVD KVHREAERLD HDHYQVLLIG HAGHPEVEGT MGQLQQARMK LISHPDDVAQ LRLSNPQKVA YITQTTLSVD ETRAMVAQLK ARFPTIKEPA KEDICYATQN RQNAVKALAQ ASDLILVLGA PNSSNSNRLR EVAEQHGCRA FLIENAKDVE IQWLEGVETL GITAGASAPE ILVEELLAHL HAEQHQVELL SVTKEYLAFP LPLELRE
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