Gene Mmc1_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3424 
Symbol 
ID4483876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4275845 
End bp4276123 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content59% 
IMG OID639724173 
ProductSSU ribosomal protein S20P 
Protein accessionYP_867316 
Protein GI117926699 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAATC ACAAGTCCGC CCTGAAACGC ATTCGTCAAT CCGCCAAGCG CACCGTTGCC 
AACCGCATCG ACAAAGCGCG TATGCGTACC TTCGCTAAAA AGGTGCTCGC CGCTGTCGAG
GCTGGTGATG TCGAGCTGGC TCAACAGACC CTGCGGGACG CCACCTCGGT GATTTCGCGC
ACGGCACAGC GTGGCGTAAT CCACACCAAT CAGGCATCGC GCCGCATTGC ACGCCTGAAC
AGCCATGTGA AAAAATTGGC GGTTGCAGCG GCCAGCTGA
 
Protein sequence
MANHKSALKR IRQSAKRTVA NRIDKARMRT FAKKVLAAVE AGDVELAQQT LRDATSVISR 
TAQRGVIHTN QASRRIARLN SHVKKLAVAA AS