Gene Mmc1_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3421 
Symbol 
ID4483873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4272639 
End bp4273025 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content54% 
IMG OID639724170 
ProductGTP cyclohydrolase I 
Protein accessionYP_867313 
Protein GI117926696 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0847539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCC CCGAAAAGGT GGAGCCCCAG CGCGCTATCC TGGAGAGCTT TGCCAACCCC 
AATCCCCAAC GGGATTATGA AATCGACATG CACTGCCCCG AGTTCACCTG TCTCTGCCCC
AAAACCGGAC AGCCCGATTT TGCTGATTTT CGCATTACCT ATGTGGCCGA TGAGAAGTGT
ATTGAGCTAA AGTCGCTTAA AATCTACATG TGGAGCTTTC GGGACCGAGG GGCCTTTCAC
GAGGCGGTCA CCAACCAGAT TATGGATGAT CTCATTGCCG TCTGCGATCC TCGCTACATG
CAGGTACAGG GTGCCTTTTA CGTGCGCGGG GGCATTACCA CTACCATCAC CGTTGAGCAC
CATAAAGAGC GCTCCACAGA GGCATAA
 
Protein sequence
MSSPEKVEPQ RAILESFANP NPQRDYEIDM HCPEFTCLCP KTGQPDFADF RITYVADEKC 
IELKSLKIYM WSFRDRGAFH EAVTNQIMDD LIAVCDPRYM QVQGAFYVRG GITTTITVEH
HKERSTEA