Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3419 |
Symbol | |
ID | 4483818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4270651 |
End bp | 4271172 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639724168 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_867311 |
Protein GI | 117926694 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.834881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGGAA ACGGCGTAAA GGGGGTAATC AAGGTGGATG AGGAGCGCGG TATGAGAGAG ACAAACACCA AGATGGCGCA TATTACAGTG GCCTTGCAGC AGTTGCCCCA TGGTGAGGGG CTGCCGCTGC CTAAGTATCA GACTGTATTG GCGGCGGGCA TGGATTTGAT GGCCGCCGTG GATAAACCGC TGACTCTGGC TCCCGGTGAG CGGGCCTTAG TGCCGACGGG TCTGGCTATG GCCCTACCCC CAGGCTATGA GGCGCAGGTG CGCCCCCGGT CAGGATTGGC CCTGAAGCAT GGGGTAACGG TGCTCAATGC GCCGGGCACC ATTGATGCCG ACTATCGGGG TGAGGTGGGG GTGATTTTAA TCAATTTGGG GCAGGAGAGC TTTACCGTAC AGCGGGGCGA GCGTATTGCG CAGCTACTGT TTGCCCCGGT GTTACGGGGG GATTGGCTAA GCACAGTCCG TTTAAGCCAG ACTTCCCGTG GTAGCGGTGG TTTTGGCCAT ACCGGGCGAT AA
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Protein sequence | MYGNGVKGVI KVDEERGMRE TNTKMAHITV ALQQLPHGEG LPLPKYQTVL AAGMDLMAAV DKPLTLAPGE RALVPTGLAM ALPPGYEAQV RPRSGLALKH GVTVLNAPGT IDADYRGEVG VILINLGQES FTVQRGERIA QLLFAPVLRG DWLSTVRLSQ TSRGSGGFGH TGR
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