| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3377 |
|---|
| Symbol | |
|---|
| ID | 4483313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4205874 |
|---|
| End bp | 4206479 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639724125 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_867269 |
|---|
| Protein GI | 117926652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.237475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.194903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATAT TATTTGGCAT GATCGTATTA TTTGTTTTAA GTGGCTGCTC AACATTGGCG
TCGAAGACGG ATGTGGGGGG TAGCCATGGT GGGGAGGGTA AGTTGTTATT GACCTCGATG
GTGGATGGGG GGGTTGTGCC AGCGTTGGAT GGGGTGGTGG TATCTTTGAG GCCGGTTGAG
ATACCGGATT ATGTGGATCG TAGTGAGTTG GTTAGGCGTG GGGGTCGTGG TGTTATTGTG
ACGGAGAGTC CGGTATGGGG GGAGTCGTTA AATCGGGGTA TAAATCGGGT TACTGAGATT
AATTTGGCGT ATTTATTAGG CAGTGCTCGT GTGGTTGGGG ATGATAGTTA TCGGCAATTT
CGGGGGGGTT TTATTTTAAA GACGCAGCTT TTTAGGTTGG ATGCGGAGGG GGATTTTTTA
GTTTTGGAGG GGCGCTGGCA TATTTTGAGG GATCGCAACC AGCCGCCGGT GTTGAGTCGG
TGGTATCGCC ATAGGGAGTC ATTGGAGGGG GATCGTTCGA TGGGGGGTCA GGCGTTGGCG
ATGAGTCGGG CGCTGATGGC GATGAACCGG GAGCAGGTGC GGGACATAGA GGGTTTATTG
AAGTAG
|
|---|
| Protein sequence | MRILFGMIVL FVLSGCSTLA SKTDVGGSHG GEGKLLLTSM VDGGVVPALD GVVVSLRPVE
IPDYVDRSEL VRRGGRGVIV TESPVWGESL NRGINRVTEI NLAYLLGSAR VVGDDSYRQF
RGGFILKTQL FRLDAEGDFL VLEGRWHILR DRNQPPVLSR WYRHRESLEG DRSMGGQALA
MSRALMAMNR EQVRDIEGLL K
|
|---|
| |