| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3367 |
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| Symbol | |
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| ID | 4482809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4194901 |
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| End bp | 4198080 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724115 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_867259 |
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| Protein GI | 117926642 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.049018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA GCCATAAGTT TATTTTGACG CTGTTGCCGC CTATTTTGCT CGCGCTCTTT
GGTTTGGGTT GGTGGCACCA TCACACCACC ATGGCTGAAG TAACCAAGGC CAACGAACGC
TATCTGCAAA CGCTGCTGGA TGGCTTTATG GAAAACGCTC TACAGCGGCG CTTTGTCATT
TTGCAAGAAA ATAATCTCAA TGATATCGCC TCCTTTGTGC AAACATACCG CCGGGAGATC
TATGCCGACG CGGAACGCAT TGCCCAAAAG CACGAAGTCC AGCTGATCAT CTACGATACC
CGTGGCAATG TTCAATACGC CACCAGCAAG CCCATCACCA AACAACCCCC TATTGAGCTC
AAGCAGCTTC TGCTTCCCGA CAGCACGGGC CGCTTGACCG CGCTGCCGCC CTCTGGGGAT
GAAGCCACGG GGGCCCTCTA TCTGCAACAG GGGTTTTCCC CTTGGCGTTG GCAGATTTTG
CTGCTTGCCA GCGATGCCCA ACTTACCGCA GCGGTACGCA ACATACGCCA CACCACCCTG
TTGGTGGCAG CACTGCTCAC AGCGGCCTTT ATCTTGCTGG TCTATGGTTT GCTGCGGCAC
TTGGTGCTGC AACCGGTTGC CCTGTTGCGA CAAGCTTCTA AGTGCATTGC CCACCACGAA
CCACTGCCTA AGTTACCCTT GACCGAAGGG GATGAGATCA GCCATTTGGC CATTGCCATT
GCGGCTATGT CTCGCTCCAT TGGCGAATAT CATCGCCATC TACAGACCCA GCGGAACCGG
TTTGAAACGT TACTGGCTGC CAACCCCGAT TTGATTAGCC TGAAAAACCG GGTCGGTATC
TATCAAGTGG TCAACCCTGC CTTTTGCCAT TTTTTGGGGC TTCCTAAAGA GGCGATCCTC
GGCCAAGATG ATGCCCGCCT GTTTACCCCC CACCAAGCCG CACGCATACG GCAAGCCGAC
CAATGGGTCT TATCCAGTGG CGCACCCTCG GCACAGGAAG AGGAGGCCGT AGGCCCTGAC
AACCTCCCGC TTTGGCTGCA CGTTATCCGC ACCCCAATCA CCCAGGCTAC GGGGGAGGTT
TCGGGCATTT TAACCACGGT GCGCAACATC TCGGCGCGAC GCATGGCCGA GGAGGCCCTG
CGCACCGCCC ATGAGGGGTT GGAGCAAGAG GTTGCCCAGC GTACCCAGGC ACTCCGTGAG
AGTGAAACCC GCCTGCGTAT TGTGACCGAA AACCTGCCTG CTGTGGTGTG GATGAGTGAT
CCCTTACTGA CCAGCATGCA CTTTGTTAGC CCGGCCTATG AACAGATCTG GGGGAAATCA
CGGGAGAGCC TGTTGCAAGA TCCACAATCC CTATGGACCA GCATCCACCC GAGTGACCGC
AGTTTTGTAC TCAAGCGCAT TCTAAACAGC AACGGTCAAC CGTGGGAGGC GGAGTATCGT
ATTCTGCATC CCGATGGCAC CACCCGTTGG ATTCGTGAAC AGGGTGCCGC CTTTCGCGAT
ACCCATAAGC AGATCCTGTT TTTAATTGGC TGCGCTTTTG ATGTGACCCC GCTAAAAGAG
ACCGAACGGG CGCTCTCCAC CGCGAAACAG GAGGCGGAAT CAGCCAACCA TGCTAAGAGT
GCCTTTTTAG CCACCATGAG CCATGAGATA CGCACCCCGT TAAATGGCAT AACCGGCATG
ATAGAGCTTT TACAACGGAG CGCTCTTAGC GTGGAACAAC GTCAACAGGT GGAGACTATC
TCCAAATGTA GCGTGGTTTT GATGGATATT TTAAACGATA TCTTGGATCT TTCCAAAATT
GAGGCTGGCC AGTTGGTATT GGAGCGCGCA CCTTTCAGCC CAACCCAACT ACTGCTTAAT
TTGTTGGAAG TGATGCAACC ACAGGCCCGC AATAAGGAGT TGGATCTACA GCTTAATATG
GATGAAAAAC TCCCCAGTAC CATGCTGGGG GATGCCACCC GTCTACGCCA AGTGGCGCTC
AACTTAATTG GCAATGCCAT TAAGTTCACC CCACGGGGAT GGGTTAAAAT AAGCTTGCTG
GTGCATGAAC GGATCGACGA TATTGTTTGG GTTGAGTTAG CGGTACAAGA TCAAGGTATC
GGAATTGCTG ATGAAAAACT TGTCCATCTG TTTAATCCTT TTACCCAAGC CGATAGCAGC
ATCACCCGCA ACTATGGGGG TACTGGGCTA GGACTGGCCA TCAGCAAACG CTTGGTCGAG
GCGATGGCCG GTGCCATTAG TGTCACCAGC ATCGAGGGCA AAGGCACCCA TTTTCGCGTG
ACCTTACCCA TGCAGGTTGC GCATACCCCT CTACCTGCCG ATGCGTTCGC CCCGCAAGAG
ACGCTTGCTC TACGACCACT ACAGATGTTG TTGGTGGAAG ATGAGACGGT TAATCAACAG
GTTGTCTGTG CCTTATTAGA GGATGAAGGA CATCACGTTG ATGTGGCCAA CCATGGGGAA
GAGGCCGTGC TTATGTGCCA GCAGCGTGCC TATCAGGTAA TTTTGATGGA TCTACGCATG
CCTAAGATGG ATGGGTTAAG CGCCACGGAG CAGATTCGCC AACAAGGCAT GAACCAACAG
ACCCCCATTA TCGCTTTAAC AGCGGATGTA TTAAAAAGCA CTCTGGATCG CTGCCTAGAG
GTCGGCATGC AGCAGGTTTT GACGAAACCC ATACGGCTGG TGCAACTTAA CCATGCCTTG
GCGCACATTG GTCTACCCAT GGCTCCGCCG CGCCCCCCTG CCCAGGCGTT ATCGGAACCA
GCGCCAGAAG CGACCGAGAG CGCTCTCCCC ACAGAGTCTG AGGAAGATAC CTGTCTTAAT
CTGACCAGGT TACGTTATCT GGTCTCAAAC ATGGATCAAG ACCATTTACT AAACATTATA
CAAGCTTTTA AAACCACTTC TGAAAATTGT CTAAGCGGCA TGCAGCAAGC GCTGGAGAAT
GGGGATGAAG GGGCCCTGCG CCACACCGCC CATAAATTGG CGGGCAGTGC CGCCACCTTG
GGACTACAGC GGGTGATGGA GATGGCCAAG ATCATGGAAG AACATAGCAG CCAACCTTCG
GTACAACACA ACCAGCTTAG CCTCTTACGC TATCAGGTGG AGTTGGGTTT TAGCGCCATC
GCCAAGGAGA CAGGTCTGTC GTTACAGATG CAGGAAACCG AACACGTTGC ATCGCTCTAA
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| Protein sequence | MKLSHKFILT LLPPILLALF GLGWWHHHTT MAEVTKANER YLQTLLDGFM ENALQRRFVI
LQENNLNDIA SFVQTYRREI YADAERIAQK HEVQLIIYDT RGNVQYATSK PITKQPPIEL
KQLLLPDSTG RLTALPPSGD EATGALYLQQ GFSPWRWQIL LLASDAQLTA AVRNIRHTTL
LVAALLTAAF ILLVYGLLRH LVLQPVALLR QASKCIAHHE PLPKLPLTEG DEISHLAIAI
AAMSRSIGEY HRHLQTQRNR FETLLAANPD LISLKNRVGI YQVVNPAFCH FLGLPKEAIL
GQDDARLFTP HQAARIRQAD QWVLSSGAPS AQEEEAVGPD NLPLWLHVIR TPITQATGEV
SGILTTVRNI SARRMAEEAL RTAHEGLEQE VAQRTQALRE SETRLRIVTE NLPAVVWMSD
PLLTSMHFVS PAYEQIWGKS RESLLQDPQS LWTSIHPSDR SFVLKRILNS NGQPWEAEYR
ILHPDGTTRW IREQGAAFRD THKQILFLIG CAFDVTPLKE TERALSTAKQ EAESANHAKS
AFLATMSHEI RTPLNGITGM IELLQRSALS VEQRQQVETI SKCSVVLMDI LNDILDLSKI
EAGQLVLERA PFSPTQLLLN LLEVMQPQAR NKELDLQLNM DEKLPSTMLG DATRLRQVAL
NLIGNAIKFT PRGWVKISLL VHERIDDIVW VELAVQDQGI GIADEKLVHL FNPFTQADSS
ITRNYGGTGL GLAISKRLVE AMAGAISVTS IEGKGTHFRV TLPMQVAHTP LPADAFAPQE
TLALRPLQML LVEDETVNQQ VVCALLEDEG HHVDVANHGE EAVLMCQQRA YQVILMDLRM
PKMDGLSATE QIRQQGMNQQ TPIIALTADV LKSTLDRCLE VGMQQVLTKP IRLVQLNHAL
AHIGLPMAPP RPPAQALSEP APEATESALP TESEEDTCLN LTRLRYLVSN MDQDHLLNII
QAFKTTSENC LSGMQQALEN GDEGALRHTA HKLAGSAATL GLQRVMEMAK IMEEHSSQPS
VQHNQLSLLR YQVELGFSAI AKETGLSLQM QETEHVASL
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