Gene Mmc1_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3365 
Symbol 
ID4482807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4192600 
End bp4193247 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content55% 
IMG OID639724113 
Productputative phage repressor 
Protein accessionYP_867257 
Protein GI117926640 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.193057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCG CATTATCCCA ACGCATTCGG CAGTGTGCCC AAAAGGTTGG CAGTGGCGAT 
ACGCTGGCCC GCCTGAGTGG TATTCCCCGG CGCACCATCG AAACCTATTT GACCGGCCAG
TCTGAACCAA AAGCATCCCG CTTGGTGGCG ATTGCACAAG CGGCTGATGT GGATGTTGGT
TGGCTGGCTT GCGGGCAAGC CAGCCAGATG GAATCAAGCC TGCCTGACGA TGAATATACG
CTGGTGCCCC GTTATGCGGT GGAGGCCAGC GCAGGGCATG GTGGCGCCAT TGATGAAGAG
CCCATTGTGG AAAAATTGGC CTTCAAATCC GACTGGATCA TTGGTGAAAT GGGGCTCGAT
AGTGAGCGTT TAGCGCTGAT AAACGTCCAT GGCGATAGCA TGGAACCCAC CTTGCGCGGT
GGTGACATGC TGCTGTTGGA TCTGCGCCGG GTGGAGGTGC GCGATGATGC CATTTATGTC
TTGCGGTTGG AAAATCATCT TATTGTCAAA CGCGCCCAAC GTATGCTGGA CGGCACCATT
TTAATTCGCA GTGACAATCC AATTTATAAA GAGCAGAGCG CCTCGCCCGA GCAAGCCCGT
CAACTGTGCG TTATAGGACG AGTGGTGTGG GTAGGGCGTC GCATCTAA
 
Protein sequence
MHAALSQRIR QCAQKVGSGD TLARLSGIPR RTIETYLTGQ SEPKASRLVA IAQAADVDVG 
WLACGQASQM ESSLPDDEYT LVPRYAVEAS AGHGGAIDEE PIVEKLAFKS DWIIGEMGLD
SERLALINVH GDSMEPTLRG GDMLLLDLRR VEVRDDAIYV LRLENHLIVK RAQRMLDGTI
LIRSDNPIYK EQSASPEQAR QLCVIGRVVW VGRRI