| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3354 |
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| Symbol | |
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| ID | 4482795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4175811 |
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| End bp | 4176806 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724101 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_867246 |
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| Protein GI | 117926629 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00431304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAC AGACCAACGA AGCTTTGGCT CGTCTGCGTA GCCTGGTTGA ACAGGATTTG
CAGCGCACCA ATGAAGTCAT TTTGGAACAG CTCAACTCCC CTGTTGAGTT GATCACCCAG
GTGGGGGATC ATCTTCTTAA CAGCGGCGGT AAGCGGTTGC GCCCCATTTT GACCTTGGTA
ACAGCCAAGC TGTTTGGGTA TCAAAAAGCC GATGTCCATG CGCTGCTGGC GGCTGTGGTG
GAGTTTATTC ACACCGCAAC CTTGCTGCAT GATGATGTGG TGGATAAGTC CAACACCCGC
CGGGGACAGG CAACCGCCAA CTCGGTATGG GGCAACAAGG CGCCCATTTT GGTTGGCGAC
TTTCTCTTTT CCCGCTCGTT TCAGATCATG GTTGAACATG GCGATTTACG GGTTTTGCGC
ATTGTTTCCG ACTGCTGCGC CATTATCTCT GAGGGCGAGG TGATGCAGTT GGTGGCCAGC
AATGATCTGG CCACCGATGA AGAGCGTTAT CTGGATGTGA TTCGCCACAA AACGGCCTCG
CTGTTTGCCT CGGCTTCGCA GTTGGGGGCG GTGGTGGCGG ATCAATCCGA CGAGATTGCC
CAGCGCATGT ATGATTATGG CATGATGTTG GGCACCGCTT ATCAGGTGGT GGATGATCTG
CTGGACTACT CGGCCGAGAC GGAAAAACTG GGCAAAAATG TAGGGGATGA TTTCCAGGAG
GGTAAGATAA CCCTACCGGT GATCCACGCT TTCCGCTCAG GCGATGCGGA AGAGCAAGCT
TTTTGGCGGC GCTGTTTGGA GGATGAAGAG CAGGATGAGA GCAGCTTTGA TCATGCCCGT
GCTTTGATTG CCAAGCATGG TTCGCTGGAC TACACCATGT CCCAGGCCCG CGCGTTGATT
GTTAAAGCCA AAGCTGCATT GGCTCCCTTG CCGGAGAGTG CCGAGCGCCA AGCACTGATG
GATTTGGCCG ACCTTTCGGT GGATCGGGAA TATTAA
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| Protein sequence | MAQQTNEALA RLRSLVEQDL QRTNEVILEQ LNSPVELITQ VGDHLLNSGG KRLRPILTLV
TAKLFGYQKA DVHALLAAVV EFIHTATLLH DDVVDKSNTR RGQATANSVW GNKAPILVGD
FLFSRSFQIM VEHGDLRVLR IVSDCCAIIS EGEVMQLVAS NDLATDEERY LDVIRHKTAS
LFASASQLGA VVADQSDEIA QRMYDYGMML GTAYQVVDDL LDYSAETEKL GKNVGDDFQE
GKITLPVIHA FRSGDAEEQA FWRRCLEDEE QDESSFDHAR ALIAKHGSLD YTMSQARALI
VKAKAALAPL PESAERQALM DLADLSVDRE Y
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