| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3277 |
|---|
| Symbol | |
|---|
| ID | 4482196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4093593 |
|---|
| End bp | 4094414 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639724028 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_867173 |
|---|
| Protein GI | 117926556 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGC CCCTAACCTC CATCTTAATG CCAGTTTTCA ATAACATTGA CATTATGGCG
ACCTCCATAC AATACCTCAC TCAATTTACC GAGACCCCCT TTGAAATTAT TTTGATTGAT
AATGGCTCCT GGGAACCCCA GACCGATGCC ACCTACGCCG CCCTAAGCCA AGATCCCCGT
ATTCAGGTGA TCCGCAATAA GACCAACCTC GGTTTTGGCC GGGCCAACAA TCTCGGCCTA
GCCCAGGCCA AGGGTCGCTA TATCGCCCTG ATTAACAGCG ACATGTTTCC CATCGCCCCA
TGGTTAGGCG CGGTGCATAA CCGCTTTGCC CAAGTTGAAA AGTGTGGGGC TGTGCAGGGG
TTAATTGTGC TGCCCAGCGC CGAGCAAGGG GTCGATCAAT GGAGCGTGCA GACCTGCGGC
TCACAATTTA ATGCCAAGGG GGAGGCAATC TACCGTCTAC CCAACCTACC CATGCATGAC
CCCCGGGTCC ACCAAGCCAG CCCGCTACAC TCCTTCATGG GGACCGGTGT GGTATTGGAC
CGCGCGGTTA TTGCCGAAGT TGGTTTTTTT GATGAAGAGT ATGACATTGT ATTTATGGAG
GATACCGATC TCTCCCTACG CATCTCTCAG GCAGGCTATC GAGTCTATTA TGAACCTGCT
GCCCGTTTTA TGCATCTCCA CAGCGCCTCC ATGCCCCATT TGGAGCAGGC TGTCTATGAT
CGCAGCCGCC ATTTTAACAA GGCGCTCTAT CATCAAAAAT GGCCGGTGGA AAAGATTGAT
GCCATCCTGC AAAAACAGGG CTTTGCCTCC ATCATGGTAT AG
|
|---|
| Protein sequence | MSQPLTSILM PVFNNIDIMA TSIQYLTQFT ETPFEIILID NGSWEPQTDA TYAALSQDPR
IQVIRNKTNL GFGRANNLGL AQAKGRYIAL INSDMFPIAP WLGAVHNRFA QVEKCGAVQG
LIVLPSAEQG VDQWSVQTCG SQFNAKGEAI YRLPNLPMHD PRVHQASPLH SFMGTGVVLD
RAVIAEVGFF DEEYDIVFME DTDLSLRISQ AGYRVYYEPA ARFMHLHSAS MPHLEQAVYD
RSRHFNKALY HQKWPVEKID AILQKQGFAS IMV
|
|---|
| |