Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3271 |
Symbol | |
ID | 4482189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4081408 |
End bp | 4086483 |
Gene Length | 5076 bp |
Protein Length | 1691 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724021 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_867167 |
Protein GI | 117926550 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATT CCAACGACAA GCTAGTAAAC ATCCTGCTGG TGGAGGATTC CAAAAGCTTT GCTGCCCTGC TCCAAGGGCA GATCCAAAAG CGCTTGGGCT TTCGTGTGGT ATGGGCAGAC TCTCTCGCCC AAACGCGCCA GCATCTTGAA CAGGCTAAAC ACCCCTTTCT TCTGGCCATA TTGGATCTGC ACCTGCCCGA CGGCCCCCAC GGCGAGGTGG TGGATCTGGT ACTGCAACAC AACCTGCCTG CCATTGTGCT GACCGGTGAC AAACAGGTGG AAATGCGCAC CCAACTCTTT AAAAAGGGTG TGCTGGACTA TTTTGTTAAA GATAACCGCA GCGTCATTGA TGCGGTTATC CATAGCGTGT TGCGGGTGGC GCGCAACCGC CACTTGACCA TGATGGTGGT GGATGACTCT CGCAGTGCCC GCGCCGTATT AGGGCAGTTT TTGCAGCGTT ATGGGTTTCA GGTGCGATTG GCTCAGGATG GGGCTGAGGC TTGGGCGCTG TTGCAAGAGA CGCCCGTGGA TCTGGTTGTG ACTGACTATG AGATGCCCAA CCTTAATGGT GTGGCACTAA CGGCCAAGCT GCGTAGCCGC TACAGCCGGG ATGAGATGGG CATTATGGGC CTCTCGTCGG CGGGTCAATC TGAGCTGGCG GTGGATTTTA TTAAGGCAGG TGCCAACGAT TATATTAACA AACCCTATGA GCCTGAAGAG CTTATTAGCC GAGTTTACCA AATGGCTGAG AGTGTGGAAC GCTACGGCGA GCTCAACCAG ATGGTGGCCC GTCACAAGGC CGTGCTGGAT AATGCTCAGG ATGCCATTAT CACCACGGAT CAGCAGGGTG ATGTGCTGAG CTACAACCCC GCCGCAGAAC GGCTGTTCGG CTACCCACGG CAAAACGTTA TGGGTGTTTC TCTGACCGAA CGGTTAATCC CTGAATCGTT ACAAAACAAG CAGGCCCCCT CCTTGACAAA TGCGATGCAT GGAGCGTTGG AAATGGTTCC GAACAAGGGC CGATTGGAGG CCATTGGTAA GCGCATTGAT GGAGAGCTGA TTGATCTTCA GGTGGCCTTA TCCGCTATGC CGCAGCAGGG GGGAGAACTC CATTATACCG CCTTTATTCA AGATATTACC GATAAAAAAC AGTTGCTTAA ATCATTAGAA GAGACCCTCT CTGCGGCGGA GAGCGCCAGT AAGGCAAAGA GTGCTTTTAT TGCCAATATG AGTCACGAAA TCCGCACCCC CATGAACGCC GTGTTGGGTT TTACCGATCT GGCTTTGCGT GGAGATCTCT CCCCCAAAGT GCGCGACTAT TTGGAAAAGA CCAAAAATGC GTCCCATTCG TTGATGGGTA TTATCAACGA TATTTTGGAC TTCTCCAAGA TGGATGTGGG GCGGCTGGAG CTGGATCCGG TTAAATTTGA TCTGCATTTT CTATTGGAGC GGTTGGCGGA TCTGTTCAGC AAGCAGGCTG CGGATCATGC GGTGGATCTG GTCTTTTTGG CCCCTTTAAA TTTTAATCAG GTGCTCTATG GCGATGCCAT GCGGCTGGAG CAGATTTTCA TTAATTTGAT CCGCAATGCG GTTAAGTTTA CCAAAAATGG TTTTATTACC GTACGCGCCC AACCCGAGCT GCTGGAGGGG CACCGTGTAC GCCTGACCTG TTCGGTAAGC GATAGTGGTA TTGGTATTGA TCCCGAACAG CTCCCCCATC TGTTTGCCCC GTTTGTGCAA GCGGACAGCT CCACCACCCG ACGTTTTGGT GGCACGGGTT TGGGGCTCTC CATAGTCAAG CGGTTGGTCT CGCTTATGGA TGGCTCGGTG TGGGCCGAGA GTGAGCCGGG TAAGGGCAGC CAATTTCACT TTGAGATCTT GGTGGATCTG TATGCCGAGG ATCGCCGCAA CCGTAGCCTG TTGCCGGATG TCCTATGGGG CGAGCGGGTG CTGGTGGTGG ATGACAATCC AGACAGCCGT GAACATTTGC AGGCACTGCT CAGTGCCTTG AGTCTATCAC CCAGCCTGTG TGCCACGCCA GCGCAGGCAC GGGCATTGCT GCTTAGTGAG CAGGGTGGGC CGCAGCCTTT TCGGTATCTA TTGGTCGATT GGGGGTTGCC AGGTAAGGAT GGGGTGGTCG CGGTTATTGA GATGCGGGCC ATGTTAAAGG CGGAGCTGCC CGAGGGACTA CACCCGCGCA TCATTTTATT AAGCGCCTTT GGGCAGGATG AGATTAAAAA CCAAGCCGAG CGTGCAGGGG TGGATTATTG TCTGGACAAA CCCATTAGCC GGGATCGTCT GGTGACGGCC TTGAGTGGCG GTTGGCACGA TCAGGAGCAG CATAAAGATC GCCGCAAGGT GCAGCAGTTG GCGGCGGAGT CGGAGATCGG TCGTTTGGTA GGAGGGGCGT ATCTGCTGCT GGTGGAGGAT AATCCCATTA ACCAGCAGGT CGCGGCGGAG CTGCTGGAGC GGGTCGGTTT GGTGGTGGAC ATTGCGGAAA ATGGTCAGCA AGCGCTGGAT CGGCTGGCGC GGTTTGAGTA TGACTTGGTG TTGATGGATC TGCACATGCC GGTGATGGAT GGCAGTGAGG CCATGCAACG CATACGGGCT CAAGAGGCAT GGCGGTCATT GCCGGTGTTG GCGCTCTCTA CGGGCACCGG GGAGGAAGAG CAGCTGGATT TGCAAGATCT GGGTTTTCAA GGTTTTTTGC ATAAGCCGAT CCGCCCCGAG CGGCTCTATG GGGCGTTGAA ACGCTGGATT ACGCGGCCTA CCTTGGATGC CTCTTGGCGG ATTGTGGCGC GGGGGGATGA GGTACCCCTA TTACGGGGGG TGGATCCTGA GATTGGGATA AACCGTTTAG CGGGCAATCA AGAGTTGTAT GTGGTTTTGC TATCACGTTT TTTTCAACTG TATGCCGAAG TGTTGCCCAG TATGCAGCAA CAGCTACAAA GGGGTCAGTG GGCCGTGTTG GGGCGGCAGA TTCATGGGTT GAGAAATCGC GCGGCGGCCC TGGGTGCGGT GGAGTTGGCC AAGGCGGTGG TGGCCTTAGA ATTGGCCATG GCCGACGGCC ATGAGGCGAT GATTGAAGCG GCTTTTCAGA GTTTTAGCCA TCGTCTGGAG CAGGTGTTGC AGGGCATTGC TAGCCATCAG GTTGAGCAGA AGGGGGTGGC GCTCTCCTCG AATTTGCTCC ACGATGATCT GCCGGAGTTG GTGGTGGACC TGCACCAAGT TGGGCCGCTG CTGGATCAAC TGGCGGGACG GCTTAAATAC CACAGTATCG ACGCTGCGGC GCTGTTGCAG GCATTGGGGG AGCTGCTTAA AGAGACCCCT TTAGCGACGG CCTATTGGAC CGTATGTAAG CAGGTGGATC GCTATAACTT TTATGAGGCA TTGCAGAGCT TTTTGCTTAT TGCCAAGGCA TTGAAGTACC CAATTATTGA TCAAAATGTG CGGTGTCCAG CCAGTGTAAA AGAGCGGATT TTGATCGTGG ATGATCAGCC GGACAACGTG GATGTGCTCA AGGATATTTT GGAGGATTAT GAGCGGATGG CGGCTCTGAG TGGCCCCGAG GCTTTGATGT TGGCCCAGTG TGACCCTGCG CCGGATATGG TGCTGCTGGA TATTATGATG CCAGAGATGA ACGGTTATGA GGTGTGCCGA CGCCTTAAAG CGATGGAGGC TACCCAGGAG ATTCCGGTCA TCTTTGTGAG TGCTAAAAAA GAGGTGGTGG ATGAGGCCGA AGGGTTCCTG ATCGGGGGGG TGGATTATAT CACCAAACCC TATCATGGGG AGGTGGTTAG GCGGCGCATC CATAGCCAGT TAGAGCTCAA ACGGCATCGG GAGCGGTTGG AAAAGCAGGT ACGTATGCGC ACCGCCGAGT TGGAGTTGGC CACCCGTGAA GCGGAGCTCC GTAAGGATGA GGCCGAGGCT GGTAACCGCG CCAAGAGCGA ATTTTTAGCC ATTATGAGCC ATGAGATCCG CACCCCGTTA AATGCCATTT TGGGCACCCA TGAGTTGCTG AGTGAAAGTG CGCTTAGCTC TGAGCAGCAA CGGCTTATGG AGATCTCCCG GAATGCGGGT GAACTGTTGC TTAATTTGGT CAATGAGACC TTGGATCTCG CGAAGATTGA AGCGGGCAAG TTGGATCTGG AGTATACCAT CTTTGACCTG CCGAGGTTGG TGGAGGAGAT TACCCAAATT AAACGGGTGG CGGCGGAGCA CAAGGGGGTG CGGTTGGAGA GCGAGATGGC CCTGGAGGTC CCCCGTTTTG TGATGGGGGA CCCGGACCGT TTGCGCCAGA TCCTGGTTAA TTTGCTCTCC AACGCCATTA AATTTACCAA CAGCGGCACC GTGAGTTTGC AGATGAGCCG GGGGGTGGCG GATCGTACCT TTTTTAAAGT GAGTGATACC GGTGTGGGCA TAGCGGCTCA TAGTATGGAG AAAATTTTCC ATCCCTTTAC CCAGGCGGAT ACCTCCACCA CCCGCAAATT TGGTGGTACC GGTCTGGGGC TGACCATCTG TAAACATCTG TGCGAAGCCA TGGGGGGAGA TATTCAGGTA GAGAGTCAGG TGGGGGTGGG GTCGACCTTT AGCGTCAATT TGCCCTTGCC ACGGGCCGAG AGCTCCATGG ATGAACCCTC AGCCCCAGAA GAGGTGATCG TCGAGCAGGT ACAAGCGCCC TTACGTATTT TAGCGGTGGA TGATGCCGAG GATAACCGTA AGCTGGTACA AGCCTTTTTA GCCAAAAGTG GGCACCATCT GGATCTGTGC GAGGATGGTG CGCAAGCCTT GGATCGCTTT AAGCGCGAAC ACTATGATCT GGTGTTAATG GATCTGCTTA TGCCCGTGCT GGATGGTTAT GGCGCCACCC GTAAGATACG CCAATGGGAG CAGCAGCAGC ATCGACTACC TACCCCTATC ATTGCGTTAA CGGCGCTGTC GGTGCGGCGG GATCTGGACA AGGCGCTGGC GTGCGGCTGT GATTTTTATT TGACCAAACC CTTTCGCAAA CACCAATTGC TGGACGCCAT TTACCGTATT CACGGTATGT TGGCAGGCTC CATTCACCAA GGTTAA
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Protein sequence | MVDSNDKLVN ILLVEDSKSF AALLQGQIQK RLGFRVVWAD SLAQTRQHLE QAKHPFLLAI LDLHLPDGPH GEVVDLVLQH NLPAIVLTGD KQVEMRTQLF KKGVLDYFVK DNRSVIDAVI HSVLRVARNR HLTMMVVDDS RSARAVLGQF LQRYGFQVRL AQDGAEAWAL LQETPVDLVV TDYEMPNLNG VALTAKLRSR YSRDEMGIMG LSSAGQSELA VDFIKAGAND YINKPYEPEE LISRVYQMAE SVERYGELNQ MVARHKAVLD NAQDAIITTD QQGDVLSYNP AAERLFGYPR QNVMGVSLTE RLIPESLQNK QAPSLTNAMH GALEMVPNKG RLEAIGKRID GELIDLQVAL SAMPQQGGEL HYTAFIQDIT DKKQLLKSLE ETLSAAESAS KAKSAFIANM SHEIRTPMNA VLGFTDLALR GDLSPKVRDY LEKTKNASHS LMGIINDILD FSKMDVGRLE LDPVKFDLHF LLERLADLFS KQAADHAVDL VFLAPLNFNQ VLYGDAMRLE QIFINLIRNA VKFTKNGFIT VRAQPELLEG HRVRLTCSVS DSGIGIDPEQ LPHLFAPFVQ ADSSTTRRFG GTGLGLSIVK RLVSLMDGSV WAESEPGKGS QFHFEILVDL YAEDRRNRSL LPDVLWGERV LVVDDNPDSR EHLQALLSAL SLSPSLCATP AQARALLLSE QGGPQPFRYL LVDWGLPGKD GVVAVIEMRA MLKAELPEGL HPRIILLSAF GQDEIKNQAE RAGVDYCLDK PISRDRLVTA LSGGWHDQEQ HKDRRKVQQL AAESEIGRLV GGAYLLLVED NPINQQVAAE LLERVGLVVD IAENGQQALD RLARFEYDLV LMDLHMPVMD GSEAMQRIRA QEAWRSLPVL ALSTGTGEEE QLDLQDLGFQ GFLHKPIRPE RLYGALKRWI TRPTLDASWR IVARGDEVPL LRGVDPEIGI NRLAGNQELY VVLLSRFFQL YAEVLPSMQQ QLQRGQWAVL GRQIHGLRNR AAALGAVELA KAVVALELAM ADGHEAMIEA AFQSFSHRLE QVLQGIASHQ VEQKGVALSS NLLHDDLPEL VVDLHQVGPL LDQLAGRLKY HSIDAAALLQ ALGELLKETP LATAYWTVCK QVDRYNFYEA LQSFLLIAKA LKYPIIDQNV RCPASVKERI LIVDDQPDNV DVLKDILEDY ERMAALSGPE ALMLAQCDPA PDMVLLDIMM PEMNGYEVCR RLKAMEATQE IPVIFVSAKK EVVDEAEGFL IGGVDYITKP YHGEVVRRRI HSQLELKRHR ERLEKQVRMR TAELELATRE AELRKDEAEA GNRAKSEFLA IMSHEIRTPL NAILGTHELL SESALSSEQQ RLMEISRNAG ELLLNLVNET LDLAKIEAGK LDLEYTIFDL PRLVEEITQI KRVAAEHKGV RLESEMALEV PRFVMGDPDR LRQILVNLLS NAIKFTNSGT VSLQMSRGVA DRTFFKVSDT GVGIAAHSME KIFHPFTQAD TSTTRKFGGT GLGLTICKHL CEAMGGDIQV ESQVGVGSTF SVNLPLPRAE SSMDEPSAPE EVIVEQVQAP LRILAVDDAE DNRKLVQAFL AKSGHHLDLC EDGAQALDRF KREHYDLVLM DLLMPVLDGY GATRKIRQWE QQQHRLPTPI IALTALSVRR DLDKALACGC DFYLTKPFRK HQLLDAIYRI HGMLAGSIHQ G
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