| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3232 |
|---|
| Symbol | |
|---|
| ID | 4483734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4025195 |
|---|
| End bp | 4026052 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639723982 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_867128 |
|---|
| Protein GI | 117926511 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.941804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.328637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTT CTCAATGGGT CATCAATGTG GACCAAAGTT CGTTTAACCA ACAGGTGATT
GAGCCATCCT ACCGGGTGCC GGTGCTGGTG GATTTCTGGG CGCCATGGTG TGGCCCCTGC
CGCGCTCTGG GTCCTATTCT TGAAAAACTG GCCAACGAAA TGGCCGGTCG TTTTATCTTG
GCTAAGGTTA ACTCCGACGA AAACCCCCAA TTAAGCCAGC AGTTTGGTGT GCAGGGCATC
CCGGCCTGTA AGCTGGTGAT CGAGGGGGCT ATTGTCGATG CGTTCACCGG GGCGCTGCCC
GAATCGGGGG TGCGTCAATT TTTGGATAAG GCCATTCCCT CTGCCGCCGA CAACGAGGCC
GCTCAGGCCG CGCTCTTAGC CCAACGGGGT GATCTGCTTG GAGCACTGGA GCTCTACCAA
AAAGGGCTCG CCGAGCAACC CGACCACACC GGCTGCCTCG TCGGCGCCGC CAGCATCGCC
CTTGCCCAGG GCAAGGATGC CGAAGCCAGC GCCTTTATGG AGCGTCTTAC CCCCAAAGGG
TTAAACAGTG ATGCCGCCAA GGCCCTGCAA AACAAGCTGG CCTTTCGTCA AACCAACCAA
GATGTGGAGA CCCTGCGACA GGATGTGGCG CGCCATCCTG ACAACCTGGA CCACCGCATC
ACTCTAGGGC AGGCACTGAT TGCCCAGGAA CAGATCGAAG CGGGGCTGGA GCAACTGTTA
TTGGCGGTTA AACAGGACCG CCACTACAAA GAAGATCACG CCCGCAAATT GATCCTCAAA
GTATTTGAGA TGCTAGGGCA TGCCCACCCC ATCACCAGCC ACTATCGGGG CAAACTTTCC
CAAGTACTCT TTACCTGA
|
|---|
| Protein sequence | MAASQWVINV DQSSFNQQVI EPSYRVPVLV DFWAPWCGPC RALGPILEKL ANEMAGRFIL
AKVNSDENPQ LSQQFGVQGI PACKLVIEGA IVDAFTGALP ESGVRQFLDK AIPSAADNEA
AQAALLAQRG DLLGALELYQ KGLAEQPDHT GCLVGAASIA LAQGKDAEAS AFMERLTPKG
LNSDAAKALQ NKLAFRQTNQ DVETLRQDVA RHPDNLDHRI TLGQALIAQE QIEAGLEQLL
LAVKQDRHYK EDHARKLILK VFEMLGHAHP ITSHYRGKLS QVLFT
|
|---|
| |