Gene Mmc1_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3213 
Symbol 
ID4481878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3996378 
End bp3996779 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content49% 
IMG OID639723962 
Productprotein translocase subunit yajC 
Protein accessionYP_867109 
Protein GI117926492 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATT TTCTGATTGC CCCTGCATTT GCCCAAGGCG CTCCCGTTAA AGGGGGTGGC 
ATGGATACCT TAATCTTCAT GGTTTTGCTG TTTGTTATGC TCTACTTTTT GCTGATTCGC
CCTCAGCAAA AGCAGGTTAA ACAGCATAAA GAGATGCTTA ATAACCTTAA CCGTGGCGAC
CGCATTCTCA CTTCTGGTGG TCTGGTTGCC AAAATCCACC GCATTGACGA CGCCAACGAT
GAACTGGTGG TGGAGATCGG TGAAGTGGAT ATTGACGGTA AAAATCGCAA GCCTGTACGT
GTGCGTCTGG TACGCGGCAA TGTGGCTAAG GTGCTGGATA AAAGCATGCC CGGCACCAGC
AACGATGATA AAGAAGAGGA GGCTAAAGAG GCGAAATCCT AA
 
Protein sequence
MLDFLIAPAF AQGAPVKGGG MDTLIFMVLL FVMLYFLLIR PQQKQVKQHK EMLNNLNRGD 
RILTSGGLVA KIHRIDDAND ELVVEIGEVD IDGKNRKPVR VRLVRGNVAK VLDKSMPGTS
NDDKEEEAKE AKS