Gene Mmc1_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3192 
Symbol 
ID4482949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3977065 
End bp3977619 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content56% 
IMG OID639723941 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_867088 
Protein GI117926471 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC ACCCCCGCGA CGTTACCCCC GCACCCTTGA TTACCGAAGC GAAGATTCAA 
CGCCGCGTGC AAGCACTGGC TAAGGAGATT ATCGCCCGCA TGGGGCAAGA GCCGGTGATG
GTGGCGTTGC TCAAGGGCTC ATTTTTGTTT GCGGCCGATC TGCTGCGGGA GATGGGCCGC
CAAGGGGCCA AACCCAAGCT GGATTTTTTG GCGGTTTCAT CCTATGGTAG CGGCACCCAA
TCCACAGGTC AGGTACAGGT TCAGCTTGCC ATTAAGGAGC CCTTGCAGGG CCGCGATGTG
CTGTTGGTTG ATGATATTTT AGATACCGGC AATACCTTTG CCCACGTCAT TGAGTTGCTC
AAGGCGCAGG GTGCGCAACA GGTATTAACC TGCACGCTGC TTAACAAGCA GGCCCGCCGC
CAGCAACCTG TCGTGGCCGA TTTTATTGGC TTTGAGGTAC CCGATGCCTT TGTGGTGGGG
TATGGTATTG ATTGGGACAA CCATTTTCGT GAGCTCCCCT ATGTAGGGGT TATCCCCCCT
GAAGCCTACC GCTAA
 
Protein sequence
MASHPRDVTP APLITEAKIQ RRVQALAKEI IARMGQEPVM VALLKGSFLF AADLLREMGR 
QGAKPKLDFL AVSSYGSGTQ STGQVQVQLA IKEPLQGRDV LLVDDILDTG NTFAHVIELL
KAQGAQQVLT CTLLNKQARR QQPVVADFIG FEVPDAFVVG YGIDWDNHFR ELPYVGVIPP
EAYR