| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3183 |
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| Symbol | |
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| ID | 4482940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3961870 |
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| End bp | 3962985 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723932 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_867079 |
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| Protein GI | 117926462 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0392805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.124808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGAT CCCGTGTCCT ATCCCTTCTT ACTCTACTCA CCCTGCTCAT GTTTACCCCC
AACAGTTGGG CGGCCCCCCG TGTGGTGGTA AGCATACTGC CCCTACATGC CTTGGTTGCC
GAGGTCATGC AGGGGGTTGC CCAACCCCAA CTGCTGCTGG ATGGTGGCAG CTCCCCCCAC
AGCTACGCCC TGCGCCCCTC CCAGGCGCGG CAATTAAGCC AAGCGGAGTT GGTGGTTTGG
ATGGGTGCTG GCTTGGAGAG CTTTCTGGTT AAACCCCTAC AAACCTTGGG CAAGCAGACC
ACCCTTCTGA CCCTGCACCA AGTGCCAGGG CTAGCCTTGT TGGAAAACCG CCAACCCCTG
CATTGGCTGG AGCAGAGCGC CGTCCATGAC CACGATGCCC ACCAGGATCA TGCGGCGGAT
ACCGACCATG ACCTTGATGC CCACCAGGAT CATGCGGCGG ATACCGACCA TGACCACGAT
GCCCACCAGG ATCATGCGGC GGATACCGAC CATGACCACG ATGCCCACCA GGATCATACT
GCGGATACCG TCCATGACCA TGATGCCCAC CAGGATCATA CTGGCCATGA CCACGGCAAA
CTAGATCTGC ACCTGTGGCT GGATCCCCAA CAGGCGATCC TCATGGTCCA CGCCGTTGCA
AAACAGCTCT CTCAACTGGA TGCCGCCAAC GCCACACGCT ACCAACAAAA CGCCCAGCAT
CTGGTGGAGC GGCTTGAGCA ACTGACCCTT CGGCTCGCCA CCCAGCTCGA ACCGGTGCGG
CAGCGCCCTT ATCTGGTGTT TCACGATGCC TACCACTATT TTGAGCGCCG TTTTGGTCTC
GCCACCACAG CGGCCCTCAC CCTCAACCCA GAAAGTCGGC CCAGTGCCAA GGCGATGCAG
CAGGTCCGCC AACTCATCCA GCGGCAAGGT GCGGTATGTC TCTTTTCTGA GCCCCAATTT
GAGCCCGCCA TGGTACAAGC CATCGCCCGG GATACCGGCC TACGCACCGC AGAACTGGAC
CCGCTGGGCA GTCAGCTGCA ACCGGGAATC GGCGCCTATT TTACCCTGCT CACAAACCTG
GCAAACGCCC TAAGCAACTG TTTAACAACA CCCTAA
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| Protein sequence | MPRSRVLSLL TLLTLLMFTP NSWAAPRVVV SILPLHALVA EVMQGVAQPQ LLLDGGSSPH
SYALRPSQAR QLSQAELVVW MGAGLESFLV KPLQTLGKQT TLLTLHQVPG LALLENRQPL
HWLEQSAVHD HDAHQDHAAD TDHDLDAHQD HAADTDHDHD AHQDHAADTD HDHDAHQDHT
ADTVHDHDAH QDHTGHDHGK LDLHLWLDPQ QAILMVHAVA KQLSQLDAAN ATRYQQNAQH
LVERLEQLTL RLATQLEPVR QRPYLVFHDA YHYFERRFGL ATTAALTLNP ESRPSAKAMQ
QVRQLIQRQG AVCLFSEPQF EPAMVQAIAR DTGLRTAELD PLGSQLQPGI GAYFTLLTNL
ANALSNCLTT P
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