| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3167 |
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| Symbol | |
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| ID | 4483271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3947418 |
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| End bp | 3948320 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723916 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_867063 |
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| Protein GI | 117926446 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000877646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0154692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATA AACATCTCCA CTATTTCTGG AAAGTCGCTC AACTGGGCAG CTTAACGGCG
GCCAGTCGGC TTTTGCGCCT GCAACCCCAA ACGCTGAGCA CCCAAATTCA GGCCTTGGAG
GCCGCCCTGG GGCAGCCCCT GTTCACCCGT ATCGGGCGTC GCATGGTGCT GACCGATGCG
GGACAACTGG TCTATGAGTA TGCCAATGAG ATGTTTTTGT TGGGCAATGA GATGCAAGAG
GTGTTGGCGG GACTACCCGC CCGACGCCCT CTAAAATTTC GGGTGGGTAT TGCGGATGTG
GTCCCCAAAC TCATTGCCTA CCATCTTCTT GAACCGGCGC TCCAGTGTGG CCGTGAGATC
CATATGGTCT GCAATGAGGA TAAGCTAGAA ACCTTGTTGG CCGATTTGGC GGCGCACAAG
TTGGATATGG TGATCTCCGA TGGGCCTATG CTGGCGGGCA CCTCGGTGAA AGCCTACCAC
CACGCCTTGG CTACCGGGGG TGTGACCTTT TTTGGCAGCG CCGCGCTGGC CGCCCGTTAT
GAAGGCAGCT TTCCCCAGCG GCTCCAGCAG GCGCCCATGC TTATGCCCAC CGAAGCAAGC
ATCCTGCGCG GGGAGATTAC CCGCTGGTTG CAGCAGCAGG GCATCACCCC ACATATTATT
GCGGAGTTTC AAGACACCGC CCTATTAAAG GCGTTTGGAC AGGCCGGAGT GGGCTTTTTC
CACGGTCCCA GCATGATCGA GGATGAGATT ATACGCCAGC ACCAGGTGGT GCGCATTGGC
CGCACCGATG CACTGCAAGC CAACTATTTT GCCATAACCA CCGAACGCCG CTTGTCTCAC
CCGGCGGCCC AGGCGATCCA GCAGCACCGT GATGATACCC TCCACGCCCC CACAGAGGAC
TAA
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| Protein sequence | MNYKHLHYFW KVAQLGSLTA ASRLLRLQPQ TLSTQIQALE AALGQPLFTR IGRRMVLTDA
GQLVYEYANE MFLLGNEMQE VLAGLPARRP LKFRVGIADV VPKLIAYHLL EPALQCGREI
HMVCNEDKLE TLLADLAAHK LDMVISDGPM LAGTSVKAYH HALATGGVTF FGSAALAARY
EGSFPQRLQQ APMLMPTEAS ILRGEITRWL QQQGITPHII AEFQDTALLK AFGQAGVGFF
HGPSMIEDEI IRQHQVVRIG RTDALQANYF AITTERRLSH PAAQAIQQHR DDTLHAPTED
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