| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3166 |
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| Symbol | |
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| ID | 4483270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3946324 |
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| End bp | 3947226 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723915 |
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| Product | HtpX peptidase |
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| Protein accession | YP_867062 |
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| Protein GI | 117926445 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000851395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0158649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTGTGCTGTT CCTAATCACC AACCTTGCCA TCATGGCGGT GTTGATGGTG
GTGCTTAACG TGATCTTTAG CCTGTTTGGG CTAAATCATG GTTCTATAGG AGGTATTGTG
GTACTGGCGC TGGTCTTTGG TATGGGGGGA TCGTTTATCT CGCTGTTTAT GTCCAAATGG
TTGGCCAAAC GCTCCACCGG TGCGGTGGTG ATTGAGCGAC CACAAGACGC CACCGAGCAG
TGGTTGCTCG AAACGGTGCG GCGGCAGAGT CAGCAGGCCG GTATTGGTAT GCCCGAGGTG
GCAATTTTTG AATCAGCCGA GGTCAACGCT TTTGCCACAG GGGCGAGCCG CAACAATGCT
TTGGTGGCGG TGAGCACGGG GCTGCTGCAT GGCATGCGTA AAGAGGAAGC CGAGGCGGTA
TTGGCCCATG AGGTCAGCCA CATTGCCAAT GGTGACATGG TGACCTTGGC GTTGATTCAA
GGGGTGTTGA ATACCTTTGT GATCTTGTTG GCCCGTCTCA TTGCTGGAGC GGTGGATAGC
GTGTTGTCCA GCCAAAGTGA TGAGGAAGAG GAGCAGGTCA GCGGTGGCGA AGGGGGCGGC
ATGGCCTATT TTGTGACCTC GCTGCTGGCT GAGATTGTGT TGGGGGTGTT GGCCAGTGTG
GTGGTGATGT GGTTTTCGCG CAAGCGTGAG TTCCGCGCCG ACGCCGGCGG GGCCAAACTG
GCCGGGCGTG AGGCCATGAT TGCCGCCCTG GAGCGTCTGC AAAAGAGCCC GGTGGAGTCT
CACCTGCCCG CTGAAACCGC CGCGTTTGCC ATTGCCGGTA AGCGGGGTGG TTTAATGGCG
CTGTTTGCTA CCCATCATCC CCTGGAAGAG CGTATCGAGG CGCTGCGTCA CGCTCGGTCG
TGA
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| Protein sequence | MKRIVLFLIT NLAIMAVLMV VLNVIFSLFG LNHGSIGGIV VLALVFGMGG SFISLFMSKW
LAKRSTGAVV IERPQDATEQ WLLETVRRQS QQAGIGMPEV AIFESAEVNA FATGASRNNA
LVAVSTGLLH GMRKEEAEAV LAHEVSHIAN GDMVTLALIQ GVLNTFVILL ARLIAGAVDS
VLSSQSDEEE EQVSGGEGGG MAYFVTSLLA EIVLGVLASV VVMWFSRKRE FRADAGGAKL
AGREAMIAAL ERLQKSPVES HLPAETAAFA IAGKRGGLMA LFATHHPLEE RIEALRHARS
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