| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3160 |
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| Symbol | |
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| ID | 4483264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3934051 |
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| End bp | 3934668 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723909 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_867056 |
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| Protein GI | 117926439 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000883166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCCTA AACAGCCTAA GAGTCCAGAA GAGATTTTGC AAAAAGCCAT TCCCTTGTTT
GCCAATGCGG GTTTTAGCGG CGTTTCTATG CGGCAGATTG CCAAGCAGGT CAACATAAGT
GCCGCAGCCC TCTATCACCA TTTTCCAGAT AAAGAGACCC TCTATCTCTC TGCTGTGGAT
CTGGTTTTTA AAGAGAAAGC CCAGCATCTC TTGCTGGCGT TACATGCCTC AGGAACGCTG
GAAACCCGAC TCTATGGGGT GATTTTACAG TTTATCCGGG TGGTGGGTAT GGACCACACC
TTTCGTGCGG TTATGCAGCG CGAGATGCTG GAGGGCGAAC CCGAACGGTT ACGCATTATG
GCAGACCGCA TGTTTAAACA ATCGTTTGGT GAAATGCGTG CGCTAGCGGC AGAGATTGCC
CCTGGGGGGG ATGCCACCTT GCTGGCGGGT ACCCTGGTTA GTTTGGTGGC GTACCATTTT
CAAACCCGCG CCTTGCGCCC CTATCTGCCT GGTTATCAGC CCTGCCATGA GTCACCCGAA
CATCTGGCCC GTTTTTACAC CCAACTCATT TTAGAAGGGG GACGTCGTTT GCCCCGCCTA
GATGGTGCGA GCGCCTGA
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| Protein sequence | MRPKQPKSPE EILQKAIPLF ANAGFSGVSM RQIAKQVNIS AAALYHHFPD KETLYLSAVD
LVFKEKAQHL LLALHASGTL ETRLYGVILQ FIRVVGMDHT FRAVMQREML EGEPERLRIM
ADRMFKQSFG EMRALAAEIA PGGDATLLAG TLVSLVAYHF QTRALRPYLP GYQPCHESPE
HLARFYTQLI LEGGRRLPRL DGASA
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