| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3139 |
|---|
| Symbol | |
|---|
| ID | 4483277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3911865 |
|---|
| End bp | 3912632 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639723887 |
|---|
| Product | cobalt ABC transporter, inner membrane subunit CbiQ |
|---|
| Protein accession | YP_867035 |
|---|
| Protein GI | 117926418 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.122579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.522263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCATA CGGTTGCCCC AGTGCGGACA GCGGCGTTGG CGGCGCTGCC CCAGGCCAGT
TGGCTGCACC GTATCGACCC ACGGCTGCGC ATTGTGTGTG CCTTGCTGTT CGCGCTGGTG
CAGGTCGCGC TGCACGAGCT GGAGCCCCTT GGTGCGGGGG TGGCTATGGG GCTGGCTATG
GTGCTCATGG CGCGTCTGCC GTGGCGCACC ATCATCAAAC GCACCTTGGG GGTGGATCTG
TTTGTGGTGT TTCTGCTGGT GATGTTGCCC TTTAGTGTGG CCGGTGAGCT ATGGTTTAGT
GTGGGCCCCT GGCAAGCCAG TTGGCAGGGG TTGCAGCAAG CGGCCGAGAT TGGCCTGAAA
GCGGTGGGGG TTATGCTCAT GCTGCTGGCC TTGGTGGGCA CCCAGGAGCC CCACCAGCTT
GGGCATGCGC TGCACCGCTT GGGGGTGCCG GATAAGTTGG TGTTGATTCT GCTGTTTACC
GCCCGTTATC TGGAGGTGTT GCGGATGGAG TATGGGCGTC TGCGTATCGC CATGAAATGC
CGTGGTTTTC AACCCCGCAG CAATGGGCAT ACGTGGCGCA GTTTCGGCTA TCTGTTTGGG
ATGCTGCTGG TGCGCTCGTT GGAGCGTTCC GAGCGCATTT ATGCGGCCAT GAAATGCCGG
GGGTTTACTG GCCATTTTTA TGTGCTCAGT CCCATGGGAT TGGGGCGTGG GGATGGGCTG
TTTGGGCTCT GTTTTGGGCT GTTGCTGCTG GTGTTGGGGG GGTGGTGA
|
|---|
| Protein sequence | MSHTVAPVRT AALAALPQAS WLHRIDPRLR IVCALLFALV QVALHELEPL GAGVAMGLAM
VLMARLPWRT IIKRTLGVDL FVVFLLVMLP FSVAGELWFS VGPWQASWQG LQQAAEIGLK
AVGVMLMLLA LVGTQEPHQL GHALHRLGVP DKLVLILLFT ARYLEVLRME YGRLRIAMKC
RGFQPRSNGH TWRSFGYLFG MLLVRSLERS ERIYAAMKCR GFTGHFYVLS PMGLGRGDGL
FGLCFGLLLL VLGGW
|
|---|
| |