Gene Mmc1_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3134 
Symbol 
ID4483129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3907449 
End bp3908102 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID639723882 
Productprecorrin-8X methylmutase 
Protein accessionYP_867030 
Protein GI117926413 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.688258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CCATTACCGA ACAAGATACC CGTGCGGGTC GCCAGATCGA GCATAACTCC 
TTCGCCATCG TGGACGCCGA GGCCGGCCCC CACCCCTATA GCGAGGCACA GTGGCAGGTG
GTGCGGCGTA TGATTCACGC TACCGCCGAC TTTGAATTTA ATGGTCTGAC ACGCTTTCAT
GATGACGCCA TGCAGGCTGG TATGGATGCG GTCAAGGCGG GGGCGGCCAT CCTCTCGGAT
GTGGAGATGA TCCGGGTGGG GCTCTCCCAG GCCCGTTTGG CACACTTTGG TATGAGCTGC
CACCAGTTTA TTAATGATGA CGATGTGGCG GCCAAAGCCA AGCAGGAGGA TACCACCCGC
GCGGTACAGG CCATGCGTAA AGCCCGTGAT AGGGGGCTTA TGCAAGGGGC TATTGTGGGC
ATTGGTAATG CCCCCACGGC GTTGTTGGAG GTGATTCGGC AGGTGCAAGC GGGGGAGAGC
CAGCCCGCCC TGATTATTGG GATGCCGGTG GGCTTTGTGT CGGCGGCGGA ATCCAAAGCG
GCGCTGCAAG GGTTGCAGCA GGTGCCGTGG ATCGTAACCC ATGGGCGCAA GGGGGGCTCG
ACCATGGTGG TGGCGGCCAT CCATGCCCTG CTTAGCCTAT GTGCCCAGCC CTAA
 
Protein sequence
MTIAITEQDT RAGRQIEHNS FAIVDAEAGP HPYSEAQWQV VRRMIHATAD FEFNGLTRFH 
DDAMQAGMDA VKAGAAILSD VEMIRVGLSQ ARLAHFGMSC HQFINDDDVA AKAKQEDTTR
AVQAMRKARD RGLMQGAIVG IGNAPTALLE VIRQVQAGES QPALIIGMPV GFVSAAESKA
ALQGLQQVPW IVTHGRKGGS TMVVAAIHAL LSLCAQP