Gene Mmc1_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3127 
Symbol 
ID4483122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3900347 
End bp3901849 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content61% 
IMG OID639723875 
Productadenosylcobyric acid synthase (glutamine-hydrolysing) 
Protein accessionYP_867023 
Protein GI117926406 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTT TTTTCTGTTT GCTGAAAGTC GCACCCATGG CCCATACCCT TATGATTCAA 
GGCACCACCT CCGATGCCGG TAAAAGTTTG ATGGTCACCG CCCTGTGCCG CCTGCTGCAC
CGGCAAGGGG TGGCGGTGGC ACCCTTTAAA CCCCAAAACA TGGCCCTCAA CAGCGCCGTC
ACCAGCGACG GGGGCGAAAT TGGCCGCGCC CAAGCGCTGC AAGCTCGCGC CTGTGGCTTG
GAACCCCATA GCGATTTTAA CCCGATTTTG CTCAAACCCA ACTCCGATGT TGGCGCCCAA
GTGATTATCC AGGGCCGCTC GGTAGGCAAT ATGAAGGCGC TGGCGTACCA CCATTTCAAG
CCCCAAGCCA TGCAGTATGT CTTGGCGGCC CATCAACGCT TGTGTCAACA CTACGAGGTC
ATTGTGGTGG AGGGCGCAGG CTCACCTGCC GAGATCAACC TACGCGCCAA TGACATCACC
AACATGGGTT TTGCCACGGC GGTGGGCTGC CCGGTGTTGT TGGTGGGGGA TATTGACCGG
GGCGGCCTGT TTGCGCAGCT GGTGGGTACC ATGCAGCTCT TAGCCCCCCC GGAACAGCAG
TTGATTCAAG GGTTTTTGGT CAATAAATTT CGAGGCGACC CAGCCCTGTT GGCACCGGGG
CTGGAACAAC TTCAGCAGCT CACCGGCAAA CCCACCCTAG GGGTACTACC CTACCTGCAC
GGCCTGCACC TGGAGGCCGA AGACTCTTTT TTTACCACCA CTCCCGCCAA TCCCCACGCC
AAGCTGACGG TGGTGGTCCC CCGCCTGCCG CGTCTAAGCA ACCATACCGA TCTGGACCCA
CTACGCAGCC ACCCCGACGT CGCCCTGCAT CTGGTGGAGG CCGGGCAAGC GATCCCCGCT
GCGGATTTAA TCCTGCTCCC GGGCAGCAAG AGCGTGCGGG CCGATCTGCA CTGGCTGCGC
CAACAGGGCT GGCAAGCTGT ACTGCAACGC CACCTGCGCT ACGGTGGGCG GTTGTTGGGT
ATCTGCGGGG GTTTTCAAAT GCTTGGCCGT CAGATTCATG ATCCCCACGG CTTGGAAGGC
AGCCCCGGCT CCATGGATGG GCTCCATTTA TTAGAGATGC AGACCACCAT CACCCCAGAA
AAACAGCTTA CCCGCCACAC CGGCAACCTG TTGCAGGGAG GGGCCGTAGA GGGCTACCAG
ATCCACATGG GGCGCAGCTC AGGCCCCGCC TTGGCCCATC CACTGCTCAC CCTGGAGGAT
GGCAGCCACG AGGGAGCCAG CAGCCAAGAT GGGCAGATTA AGGGGAGCTA TCTGCATGGT
CTGCTGGACC ATCCCGAAGC CCTCGCCAGC CTACTAAACT GGGCAGCCCC CCACCACAGC
CTGCCGGTTC AGGATATTCG CCAGCTCCGC GAGGCCAGCA TCGACCGGCT TGCCGATGCT
TTTGCCGAGC ATGTGGACAT GGCCTTCATC CACGCGCTTC TGCACCGCGC CCAGCCCAAC
TAA
 
Protein sequence
MALFFCLLKV APMAHTLMIQ GTTSDAGKSL MVTALCRLLH RQGVAVAPFK PQNMALNSAV 
TSDGGEIGRA QALQARACGL EPHSDFNPIL LKPNSDVGAQ VIIQGRSVGN MKALAYHHFK
PQAMQYVLAA HQRLCQHYEV IVVEGAGSPA EINLRANDIT NMGFATAVGC PVLLVGDIDR
GGLFAQLVGT MQLLAPPEQQ LIQGFLVNKF RGDPALLAPG LEQLQQLTGK PTLGVLPYLH
GLHLEAEDSF FTTTPANPHA KLTVVVPRLP RLSNHTDLDP LRSHPDVALH LVEAGQAIPA
ADLILLPGSK SVRADLHWLR QQGWQAVLQR HLRYGGRLLG ICGGFQMLGR QIHDPHGLEG
SPGSMDGLHL LEMQTTITPE KQLTRHTGNL LQGGAVEGYQ IHMGRSSGPA LAHPLLTLED
GSHEGASSQD GQIKGSYLHG LLDHPEALAS LLNWAAPHHS LPVQDIRQLR EASIDRLADA
FAEHVDMAFI HALLHRAQPN