Gene Mmc1_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3100 
Symbol 
ID4481675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3867769 
End bp3868560 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content56% 
IMG OID639723847 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_866996 
Protein GI117926379 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCG CACTCTGGAC ATCTGCCACC GGCATGCAGG CTCAGCAGAC CAATATTGAT 
GTGATCGCCA ACAACTTGGC CAATACCAAC ACCGCCGGTT TTAAACGTTC CCGGGCAGAC
TTTCAGGATC TGCTCTACCA GAACATGCGG GCCGCCGGTG CGGCAACCTC GCAGGCGGGC
AACCAAGTGC CCGTGGGCAT CCAGCTCGGT CATGGTGTGC GCACCGTGTC GGTGAGCAAA
ATGTTTACCC AGGGTGACTA TGTGCAGACC GGTAATGAGC TGGATATGGC CATTGAAGGC
AAGGGATTTT TCCAAATTCA AATGCCCGAT GGCTCCACCG CTTACACCCG TGACGGAACC
TTTAAGCTGG ATAACAGCGG GCAGATCGTA ACCGCTGACG GTTATGTGTT GGATCCTGGT
CTGACCCTGC CCCAAAACGC CACCAATGTG GCGGTTGGTC CCGATGGTAC GGTGGCGGTC
AAGACCCCCG ATCAGGCCGA TCTGACCCAG GTTGGTCAGA TCCAGTTGGC GCAATTTATC
AATCCAGCCG GTCTGAACGC CATTGGTCGT AACCTCTACA CCGAGTCTGG TGCTTCGGGC
GCGCCGGTGG TGGGCACGGC TGGTGAAGAT GGTCTGGGTA CCGTGCAGCA GCAATATCTG
GAACTCTCTA ACGTGAACAT GGTGGAAGAG ATGGTGAATA TGATCGCTTC GCAGCGGGCT
TATGAGATCA ACTCCAAAAC CGTGCAGACC GCCGATGATA TGCTGGGTAA AGTGGCCAGC
ATGAAGCGCT AA
 
Protein sequence
MIRALWTSAT GMQAQQTNID VIANNLANTN TAGFKRSRAD FQDLLYQNMR AAGAATSQAG 
NQVPVGIQLG HGVRTVSVSK MFTQGDYVQT GNELDMAIEG KGFFQIQMPD GSTAYTRDGT
FKLDNSGQIV TADGYVLDPG LTLPQNATNV AVGPDGTVAV KTPDQADLTQ VGQIQLAQFI
NPAGLNAIGR NLYTESGASG APVVGTAGED GLGTVQQQYL ELSNVNMVEE MVNMIASQRA
YEINSKTVQT ADDMLGKVAS MKR