Gene Mmc1_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3093 
Symbol 
ID4481668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3862801 
End bp3863034 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content58% 
IMG OID639723840 
Productcarbon storage regulator, CsrA / carbon storage regulator, CsrA 
Protein accessionYP_866989 
Protein GI117926372 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTT TGACACGGAG AGTCGGTGAG AGTCTGCACA TTGGGGATGA TATTAAGATC 
ACCCTGTTGG GCATCAAGGG GAATCAGGTG CGCATCGGCA TTGACGCGCC GCGAGATGTG
GAGGTGCATC GTGAGGAGAT TTACGACCGC ATCCGCCGCG AGACGCGCAA GGCCAACCGC
CGCACCGCCG AAGAGACCCT GGATCAGGCG TCGCGCCTGC TTTCGCAAAA ATAG
 
Protein sequence
MLILTRRVGE SLHIGDDIKI TLLGIKGNQV RIGIDAPRDV EVHREEIYDR IRRETRKANR 
RTAEETLDQA SRLLSQK