Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3070 |
Symbol | |
ID | 4483152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3835670 |
End bp | 3839170 |
Gene Length | 3501 bp |
Protein Length | 1166 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723818 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_866967 |
Protein GI | 117926350 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00109625 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCAAAG AACTGACAGC CTATCATGAT ATCAGCTCAC CAAAAAAAAG GATGGCGGGC ATAGCCTTTA AACTTTTGGT GCTGGTGCTG CTGTTCGCAA CGGCGTTCGA AAATTATCCT CTTTTCCATA TTCTGGCGGA GTTGTTCAGC GTTATCATTG CCATAACCTT TTTTGTGATT ACTTGGAACA GTCGGCGTTT TTTTGATAAT CACTTTCTCC TCTTTATCGG AATTTCATTT TTATTTGTGG GCATCCTGGA TCTGATTCAC GCCTTGGGTT ATAAGGGCAT GATGATTTTT GAGCGCAAGG ATGCCAATTT GGCAACCCAA ATATGGATAG CCACGCGTTT TCTTGAAAGC TTCTCCTTTT TAGGCGCTTT TCTGTTTATT CGTCGTAAAG TGGTGCCAGA GCTGTTAATG GCGCTCTATG GGATCATAAC GACGCTGCTG TTGTTGTCGA TCTTTGAATG GAACCTGTTC CCTGACTGCC TGGTGGAGGG GCAGGGATTA ACCCCCTTCA AAATTTACAG TGAATATGGG GTTAGTCTCT TGTTGGTGGT TGGCATGCTG TTGTTACACC ACCATCGAGA CCGATTTAAT AAAAGTGTGT TGGGCTATCT GCATTGGGCC ATGCTCATTA CGATCTGTGC GGAATTGTGT TTTACCAGCT ATTTACATGC CTATGGTGTC TCTAATCTAC TGGGGCATGT TTTTAAAATC ATTGCCTTCT ATCTGCTCTA TAAAGCGGTC GTGGAGACCT CGTTAAAAAC ACCCTTTCAA ACCCTTTACC ATAATATCCT TTTGGGACAA GAGGCCCTAG AGAGCGCTAA CCAAGCCTTA ATACACCAAA ATATACAGTT GGAAATGGTG CAAACGGTTG CTCATCTTGG CCACTGGTTC TGGGAGATTA AGCCAGATAG GTTTGTGTTA TCGACAGAAG CATACCACAT TTTGGCGATC GATCCGGCTA TCGCGCAGCC CACCGTGGAG ATGATCCACA ATCATATCCC TGATCCCTAC AAACAACAGG TTATCGAGCA GTTAGAGCAA GTGCTTACCG GAAACGCGGT GCACTTTCAG ACCGAGCATC CTGTGCGCCA TGCCGATGGC CGTTTAACGC ATGTCTTTGC GCGGGCCGAG GTGATCTGGG AGAGCGGGGT CGCGGTAAAG ATGATCGGTA CCGTGCTGGA TGTGACCGAG CAGAAGCTTA GGGAGCAGGA GTTAGATGAG GGAAAATTAA AACTGCGCAC CGCATTGGAG GAGAGAGAGA AGGCCCTACA GTGTGCAGAG CAGGCCAACT TGGCAAAGAG TGATTTTCTG GCGAATATGA GCCATGAAAT TCGCACGCCG CTGAATGCCA TTATCAACCT GAGCTATCTT ATATTACAGA CGCCGCTGAC GTCAAAACAG TCGAATTATC TGGAAAAAAT TGAATCGGCA GGGCGTACTT TGCTCGGGGT AATCAACGAT ATCTTGGATT ATTCCAAAAT CGAGGCGGGG CATCTTGTGC TGGATCACGT CGCCTTCCAA TTAGATGATG TGATCAGCAA TGTTGCCAAC ATCGCCATTG CCCGCAAAGA GGATAAGGAT CTGGACCTGC TCTATCACGT GACGCCCAGC ACACCCACAC AGATGATGGG CGACCCCATG CGGTTGGGTG CCGTGCTGAT CAATTTGACC AACAATGCTA TTAAATTTAC AGAGCATGGC GAGGTGGTCA TTCGGGTGGA TGCCAAGCAG CAGCGTGAGC AGCATTATCT TCTCCATTTT TCCGTGCAGG ATACGGGTAT TGGTATCTCT GCTGAGCAAC AAAAGCGCTT GTTCCAAAGC TTCAGCCAGG CGGACAGCTC CATTTCTCGC CGATATGGGG GGACCGGTTT AGGGTTGGCG ATCAGTAAGA AATTGGTTGA ACTGATGGGT GGCACACTCA GCTTGCAGAG TGTTGTTGGT CAGGGCACCA CGTTTGAATT CACCATTCCC TTGCAAGCCG TTGAGATCAA GCCTGATGAG GTGCCCTCTG CCACCAGCCT CAATGGTGTG CGCGTGCTGG TGGTGGACGA TAATGCAACA GCACGGGAGA TTCTTGAAGA GCAACTAAAC GCGTTTCATA TGGAGGTGTG CAGCGTCGCT TCGGGCGAGG CGGCGTTGGA TGTTTTACAC CATGAGCCCC GCCCAGAGTT GATCTTGCTG GATGATCAAA TGACCGGGTT GAGCGGGGTA GAGACGGTGC GGCGGCTACG CGGCCAAATC AATCTGGCGC GTATACCCGA GGTGCTTATG CTGTCGGACC ATGGCCGAGA AAAGGTGCGT CAGGAGGCCG AGGCGCTTGG CATAACCCAC TTCATGTGTA AGCCCATTTC GCCCTCGGTG CTGTTGGAGA CACTGCTTGA GGTGCGTGGT GAGTGCTTGC CGCGCAAGCA GCGCTCGCGT CGTCCCCTTA TCCATCCGGA GCTTAGGGAT GGTCTAAGCG CCATCGCGGG GGCGCGTGTC CTGTTGGTGG AGGATAATGC AATAAACCAG GAAATCGCCA TAGAGTTGTT AGGCTATGCC GGGGTAGCGG TCACACCTGC TGCCAGTGGG CAGTCGGCAC TGGACCTGCT CAACAGCGAG GCCCCTTTTG ATCTGGTTTT AATGGACATT CAAATGTCCG ATATGGATGG CTATGCAACC ACGCGTCAGT TGCGCCAGGA CCCCCGTTTT AAGACGCTGC CGGTGGTGGC GATGACGGCC CACGCCATGG TAAGTGACCG TGAAAAGGCT TTGCAGTTGG GCATGCAGGA CCATATACCC AAGCCCATAG AACCCGAGCA ACTTTTTGCA GCACTGGTAC AATGGATCAA ACCGCGACAG GCCAACCAGC AACCGCTCAA TCTCTCTCCG CAAGCCCCTA GGCCGCTAGA GGAGATGGTC TTGCCAGAGC TGACCGGTGT TGATGTACAA GCAGGTTTGG CCAGGGTGGG GGGCAATGCG GAGTTGTTGC GCAAACTGCT GGTTCGGTTT GCCCAGGAGA ACAGTGCTAT AACGCAGAAA ATTTCTAATC TGGCGACGGA GAACCCAGCT CAAGCGGGAG AGTTGATCCA TTCATTTAAA GGGGTTGCTG GAAATTTAGG GATGCCTCAG GTGGCCAAGA GTGCACGCGC TGTAGAGTTA GCTTTAAAGG GTTCTGAATC TCTTGATGCG GCCTTGCATG GGCTCACGCG GGTTTTAGAT CCCATTTTAA AAGGGTTGTC TAAGCTGGAT ACCACGCTTG AAGAGGCCTA TTCAGAAGCC CAGCCTTTGG AACCTGCGCG GGTATTGTCG CGGATTGAGG AGATGTCTGC CATGTTGGAA CAAGATTTTG CTGTGGCACA ACATGTTCAG GGGCAACTGC AAACGCTGTT ACAACAGAGC CGATACGCCC ATAAATTCCA GCAGGTAGTG GCGGCGATGG ATGAATTTGA TACGGACCGG GTGCAAGCTC TGCTTACGGA AATCGCTGGG CAATTGAGCC AGCCTGCATA A
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Protein sequence | MIKELTAYHD ISSPKKRMAG IAFKLLVLVL LFATAFENYP LFHILAELFS VIIAITFFVI TWNSRRFFDN HFLLFIGISF LFVGILDLIH ALGYKGMMIF ERKDANLATQ IWIATRFLES FSFLGAFLFI RRKVVPELLM ALYGIITTLL LLSIFEWNLF PDCLVEGQGL TPFKIYSEYG VSLLLVVGML LLHHHRDRFN KSVLGYLHWA MLITICAELC FTSYLHAYGV SNLLGHVFKI IAFYLLYKAV VETSLKTPFQ TLYHNILLGQ EALESANQAL IHQNIQLEMV QTVAHLGHWF WEIKPDRFVL STEAYHILAI DPAIAQPTVE MIHNHIPDPY KQQVIEQLEQ VLTGNAVHFQ TEHPVRHADG RLTHVFARAE VIWESGVAVK MIGTVLDVTE QKLREQELDE GKLKLRTALE EREKALQCAE QANLAKSDFL ANMSHEIRTP LNAIINLSYL ILQTPLTSKQ SNYLEKIESA GRTLLGVIND ILDYSKIEAG HLVLDHVAFQ LDDVISNVAN IAIARKEDKD LDLLYHVTPS TPTQMMGDPM RLGAVLINLT NNAIKFTEHG EVVIRVDAKQ QREQHYLLHF SVQDTGIGIS AEQQKRLFQS FSQADSSISR RYGGTGLGLA ISKKLVELMG GTLSLQSVVG QGTTFEFTIP LQAVEIKPDE VPSATSLNGV RVLVVDDNAT AREILEEQLN AFHMEVCSVA SGEAALDVLH HEPRPELILL DDQMTGLSGV ETVRRLRGQI NLARIPEVLM LSDHGREKVR QEAEALGITH FMCKPISPSV LLETLLEVRG ECLPRKQRSR RPLIHPELRD GLSAIAGARV LLVEDNAINQ EIAIELLGYA GVAVTPAASG QSALDLLNSE APFDLVLMDI QMSDMDGYAT TRQLRQDPRF KTLPVVAMTA HAMVSDREKA LQLGMQDHIP KPIEPEQLFA ALVQWIKPRQ ANQQPLNLSP QAPRPLEEMV LPELTGVDVQ AGLARVGGNA ELLRKLLVRF AQENSAITQK ISNLATENPA QAGELIHSFK GVAGNLGMPQ VAKSARAVEL ALKGSESLDA ALHGLTRVLD PILKGLSKLD TTLEEAYSEA QPLEPARVLS RIEEMSAMLE QDFAVAQHVQ GQLQTLLQQS RYAHKFQQVV AAMDEFDTDR VQALLTEIAG QLSQPA
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