Gene Mmc1_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3070 
Symbol 
ID4483152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3835670 
End bp3839170 
Gene Length3501 bp 
Protein Length1166 aa 
Translation table11 
GC content51% 
IMG OID639723818 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_866967 
Protein GI117926350 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00109625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAAG AACTGACAGC CTATCATGAT ATCAGCTCAC CAAAAAAAAG GATGGCGGGC 
ATAGCCTTTA AACTTTTGGT GCTGGTGCTG CTGTTCGCAA CGGCGTTCGA AAATTATCCT
CTTTTCCATA TTCTGGCGGA GTTGTTCAGC GTTATCATTG CCATAACCTT TTTTGTGATT
ACTTGGAACA GTCGGCGTTT TTTTGATAAT CACTTTCTCC TCTTTATCGG AATTTCATTT
TTATTTGTGG GCATCCTGGA TCTGATTCAC GCCTTGGGTT ATAAGGGCAT GATGATTTTT
GAGCGCAAGG ATGCCAATTT GGCAACCCAA ATATGGATAG CCACGCGTTT TCTTGAAAGC
TTCTCCTTTT TAGGCGCTTT TCTGTTTATT CGTCGTAAAG TGGTGCCAGA GCTGTTAATG
GCGCTCTATG GGATCATAAC GACGCTGCTG TTGTTGTCGA TCTTTGAATG GAACCTGTTC
CCTGACTGCC TGGTGGAGGG GCAGGGATTA ACCCCCTTCA AAATTTACAG TGAATATGGG
GTTAGTCTCT TGTTGGTGGT TGGCATGCTG TTGTTACACC ACCATCGAGA CCGATTTAAT
AAAAGTGTGT TGGGCTATCT GCATTGGGCC ATGCTCATTA CGATCTGTGC GGAATTGTGT
TTTACCAGCT ATTTACATGC CTATGGTGTC TCTAATCTAC TGGGGCATGT TTTTAAAATC
ATTGCCTTCT ATCTGCTCTA TAAAGCGGTC GTGGAGACCT CGTTAAAAAC ACCCTTTCAA
ACCCTTTACC ATAATATCCT TTTGGGACAA GAGGCCCTAG AGAGCGCTAA CCAAGCCTTA
ATACACCAAA ATATACAGTT GGAAATGGTG CAAACGGTTG CTCATCTTGG CCACTGGTTC
TGGGAGATTA AGCCAGATAG GTTTGTGTTA TCGACAGAAG CATACCACAT TTTGGCGATC
GATCCGGCTA TCGCGCAGCC CACCGTGGAG ATGATCCACA ATCATATCCC TGATCCCTAC
AAACAACAGG TTATCGAGCA GTTAGAGCAA GTGCTTACCG GAAACGCGGT GCACTTTCAG
ACCGAGCATC CTGTGCGCCA TGCCGATGGC CGTTTAACGC ATGTCTTTGC GCGGGCCGAG
GTGATCTGGG AGAGCGGGGT CGCGGTAAAG ATGATCGGTA CCGTGCTGGA TGTGACCGAG
CAGAAGCTTA GGGAGCAGGA GTTAGATGAG GGAAAATTAA AACTGCGCAC CGCATTGGAG
GAGAGAGAGA AGGCCCTACA GTGTGCAGAG CAGGCCAACT TGGCAAAGAG TGATTTTCTG
GCGAATATGA GCCATGAAAT TCGCACGCCG CTGAATGCCA TTATCAACCT GAGCTATCTT
ATATTACAGA CGCCGCTGAC GTCAAAACAG TCGAATTATC TGGAAAAAAT TGAATCGGCA
GGGCGTACTT TGCTCGGGGT AATCAACGAT ATCTTGGATT ATTCCAAAAT CGAGGCGGGG
CATCTTGTGC TGGATCACGT CGCCTTCCAA TTAGATGATG TGATCAGCAA TGTTGCCAAC
ATCGCCATTG CCCGCAAAGA GGATAAGGAT CTGGACCTGC TCTATCACGT GACGCCCAGC
ACACCCACAC AGATGATGGG CGACCCCATG CGGTTGGGTG CCGTGCTGAT CAATTTGACC
AACAATGCTA TTAAATTTAC AGAGCATGGC GAGGTGGTCA TTCGGGTGGA TGCCAAGCAG
CAGCGTGAGC AGCATTATCT TCTCCATTTT TCCGTGCAGG ATACGGGTAT TGGTATCTCT
GCTGAGCAAC AAAAGCGCTT GTTCCAAAGC TTCAGCCAGG CGGACAGCTC CATTTCTCGC
CGATATGGGG GGACCGGTTT AGGGTTGGCG ATCAGTAAGA AATTGGTTGA ACTGATGGGT
GGCACACTCA GCTTGCAGAG TGTTGTTGGT CAGGGCACCA CGTTTGAATT CACCATTCCC
TTGCAAGCCG TTGAGATCAA GCCTGATGAG GTGCCCTCTG CCACCAGCCT CAATGGTGTG
CGCGTGCTGG TGGTGGACGA TAATGCAACA GCACGGGAGA TTCTTGAAGA GCAACTAAAC
GCGTTTCATA TGGAGGTGTG CAGCGTCGCT TCGGGCGAGG CGGCGTTGGA TGTTTTACAC
CATGAGCCCC GCCCAGAGTT GATCTTGCTG GATGATCAAA TGACCGGGTT GAGCGGGGTA
GAGACGGTGC GGCGGCTACG CGGCCAAATC AATCTGGCGC GTATACCCGA GGTGCTTATG
CTGTCGGACC ATGGCCGAGA AAAGGTGCGT CAGGAGGCCG AGGCGCTTGG CATAACCCAC
TTCATGTGTA AGCCCATTTC GCCCTCGGTG CTGTTGGAGA CACTGCTTGA GGTGCGTGGT
GAGTGCTTGC CGCGCAAGCA GCGCTCGCGT CGTCCCCTTA TCCATCCGGA GCTTAGGGAT
GGTCTAAGCG CCATCGCGGG GGCGCGTGTC CTGTTGGTGG AGGATAATGC AATAAACCAG
GAAATCGCCA TAGAGTTGTT AGGCTATGCC GGGGTAGCGG TCACACCTGC TGCCAGTGGG
CAGTCGGCAC TGGACCTGCT CAACAGCGAG GCCCCTTTTG ATCTGGTTTT AATGGACATT
CAAATGTCCG ATATGGATGG CTATGCAACC ACGCGTCAGT TGCGCCAGGA CCCCCGTTTT
AAGACGCTGC CGGTGGTGGC GATGACGGCC CACGCCATGG TAAGTGACCG TGAAAAGGCT
TTGCAGTTGG GCATGCAGGA CCATATACCC AAGCCCATAG AACCCGAGCA ACTTTTTGCA
GCACTGGTAC AATGGATCAA ACCGCGACAG GCCAACCAGC AACCGCTCAA TCTCTCTCCG
CAAGCCCCTA GGCCGCTAGA GGAGATGGTC TTGCCAGAGC TGACCGGTGT TGATGTACAA
GCAGGTTTGG CCAGGGTGGG GGGCAATGCG GAGTTGTTGC GCAAACTGCT GGTTCGGTTT
GCCCAGGAGA ACAGTGCTAT AACGCAGAAA ATTTCTAATC TGGCGACGGA GAACCCAGCT
CAAGCGGGAG AGTTGATCCA TTCATTTAAA GGGGTTGCTG GAAATTTAGG GATGCCTCAG
GTGGCCAAGA GTGCACGCGC TGTAGAGTTA GCTTTAAAGG GTTCTGAATC TCTTGATGCG
GCCTTGCATG GGCTCACGCG GGTTTTAGAT CCCATTTTAA AAGGGTTGTC TAAGCTGGAT
ACCACGCTTG AAGAGGCCTA TTCAGAAGCC CAGCCTTTGG AACCTGCGCG GGTATTGTCG
CGGATTGAGG AGATGTCTGC CATGTTGGAA CAAGATTTTG CTGTGGCACA ACATGTTCAG
GGGCAACTGC AAACGCTGTT ACAACAGAGC CGATACGCCC ATAAATTCCA GCAGGTAGTG
GCGGCGATGG ATGAATTTGA TACGGACCGG GTGCAAGCTC TGCTTACGGA AATCGCTGGG
CAATTGAGCC AGCCTGCATA A
 
Protein sequence
MIKELTAYHD ISSPKKRMAG IAFKLLVLVL LFATAFENYP LFHILAELFS VIIAITFFVI 
TWNSRRFFDN HFLLFIGISF LFVGILDLIH ALGYKGMMIF ERKDANLATQ IWIATRFLES
FSFLGAFLFI RRKVVPELLM ALYGIITTLL LLSIFEWNLF PDCLVEGQGL TPFKIYSEYG
VSLLLVVGML LLHHHRDRFN KSVLGYLHWA MLITICAELC FTSYLHAYGV SNLLGHVFKI
IAFYLLYKAV VETSLKTPFQ TLYHNILLGQ EALESANQAL IHQNIQLEMV QTVAHLGHWF
WEIKPDRFVL STEAYHILAI DPAIAQPTVE MIHNHIPDPY KQQVIEQLEQ VLTGNAVHFQ
TEHPVRHADG RLTHVFARAE VIWESGVAVK MIGTVLDVTE QKLREQELDE GKLKLRTALE
EREKALQCAE QANLAKSDFL ANMSHEIRTP LNAIINLSYL ILQTPLTSKQ SNYLEKIESA
GRTLLGVIND ILDYSKIEAG HLVLDHVAFQ LDDVISNVAN IAIARKEDKD LDLLYHVTPS
TPTQMMGDPM RLGAVLINLT NNAIKFTEHG EVVIRVDAKQ QREQHYLLHF SVQDTGIGIS
AEQQKRLFQS FSQADSSISR RYGGTGLGLA ISKKLVELMG GTLSLQSVVG QGTTFEFTIP
LQAVEIKPDE VPSATSLNGV RVLVVDDNAT AREILEEQLN AFHMEVCSVA SGEAALDVLH
HEPRPELILL DDQMTGLSGV ETVRRLRGQI NLARIPEVLM LSDHGREKVR QEAEALGITH
FMCKPISPSV LLETLLEVRG ECLPRKQRSR RPLIHPELRD GLSAIAGARV LLVEDNAINQ
EIAIELLGYA GVAVTPAASG QSALDLLNSE APFDLVLMDI QMSDMDGYAT TRQLRQDPRF
KTLPVVAMTA HAMVSDREKA LQLGMQDHIP KPIEPEQLFA ALVQWIKPRQ ANQQPLNLSP
QAPRPLEEMV LPELTGVDVQ AGLARVGGNA ELLRKLLVRF AQENSAITQK ISNLATENPA
QAGELIHSFK GVAGNLGMPQ VAKSARAVEL ALKGSESLDA ALHGLTRVLD PILKGLSKLD
TTLEEAYSEA QPLEPARVLS RIEEMSAMLE QDFAVAQHVQ GQLQTLLQQS RYAHKFQQVV
AAMDEFDTDR VQALLTEIAG QLSQPA