| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3058 |
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| Symbol | |
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| ID | 4483518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3824854 |
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| End bp | 3826731 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723806 |
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| Product | Fe-S protein assembly chaperone HscA |
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| Protein accession | YP_866955 |
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| Protein GI | 117926338 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.156857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000109357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGTTGTTC TACTGGATAT TGCAGAACCT GGGCAGTCGG CCAAACCCCA CGAGGCACGC
CCCGAGGATA TGCGGCGGGT GGTGGGGATT GATTTGGGGA CCACCTATTC GCTGGTGGCG
GCAATAGATC AGGAGAATAA GCCGGGTTGT ATTCCCCTGC CCGAGGGTGG GTTTGCCATT
CCATCGGTGG TGCATTATGG GGCCGATGGT GGTGTGTTGG TGGGCCATGC CGCGCGGGAG
CTGGCGGTGA GCCATCCCCA CGCGACGGTG ATTTCAGCCA AGCGTTTTAT GGGGCGTGGT
TTAGAGGATG TGCAGGGCGA GGGCAAGCGC ACCCCTTACC GGTTGGAAGC GGGTGAAGGG
GGCATGGTGC GTATGGATAC GGGGGTGGGT AAGGTATCAC CGGTTGAGGT CTCCGCAGAA
ATTTTAAGTT ATTTAAAAGC CCAGGCTGAG CAGGCTCTGG GGGGTGCGTT GTATGGTGCG
GTGATTACCG TGCCCGCCTA TTTTGATGAT GCCCAGCGCC AGGCAACCAA GGATGCGGGG
CGCTTGGCGG GGTTGGAGGT GATGCGCTTG GTTAATGAGC CCACCGCTGC GGCCTTAGCC
TATGGGTTAG AGGCGGGCAA AGAGGGCATG TATGCGGTAT ATGATCTGGG GGGTGGTACC
TTTGATATCT CCATTTTAAA GTTGAGCAAG GGGGTGTTTC AGGTGATGTC CACCGGAGGT
GATTCGGCGT TGGGTGGGGA TGATTTTGAT CACGCTTTGG GGGATCTGTT TTTGCGGGAG
ATGGGGGTTG AGCAGCCCAG TGCCGAGCAG CAGCAGCAGG TGATGCGCAG TGCGCGGCTG
GCCAAGGAGG CGCTTACCGA TGCTGAGCAG GTTGAGGTGG TGATCGGTGA CTATGGGCGC
ACACTGAGCA AGGCTGAGTT TGAGGGGGCG ATTGATGCGC TGGTTAAGCG TACGGGTCTG
CCCTGTCGGC GGGCTTTAAA GGATGCCGGG GTGAAGCCGG GGGCGTTGCA GGGGGTCGTA
TTGGTGGGGG GTTCGACCCG GGTGCCCAAG GTGCGTGCCT ATGTGGCGGA GCTGTTTCAG
CGGGAGCCTT TGAGTGATCT GGATCCCGAT AAGGTGGTGG CGTTGGGGGC GGCTTTGCAG
GCGGATCTGT TGGCGGGCAA CCGACGCGGT GAAGATTTGC TGTTGTTGGA TGTGACGCCG
CTGTCGCTGG GGGTGGAGAC CATGGGGGGG TTGATGGAGA AGATTATTCC CCGCAACAGC
CCCACGCCCA CGGCGCGCGC CCAGGAGTTT ACCACGTTTA AGGACAATCA GACGGCGATG
GTGATTCAGG TTGTGCAGGG TGAGCGGGAG ATGGCGGCAG AGAACCGCAG CTTGGCCCGT
TTTGAGTTGC GGGGTATTCC ACCCATGGTG GCGGGGGCGG CGCGTATTCG GGTGACCTAT
CAGGTGGATG CGGATGGGCT GCTGACGGTA TCGGCGGAGG AGATGACCAC TGGGGTTAAG
CAGACGGTGG AGGTCAAGCC GGCTTATGGT TTGTCGGATG CTGAGATTGA GGGCATGCTA
CGGGACGCGC TGAGCCATGG TGAGGCGGAT ATGGAGGCGC GTCGGTTGAG TGAGGCGCGG
GTTGAGGTTG ATCGGGTCTT GAATGCGCTG GATGCGGCGT TGGCTAAGGA TGTGGATCTG
CTTAGCGAGG CGGAGGTGCA GGGCATTAAG GCGGCGGTGG AGCAGTTGGT GGGCGTTGCG
GCGGGCACTG ATGCGACGGC CATCAATCAG GGCATTGAGG CATTGGACAA GGCGACCACC
TTTTTTGCCC AGCGGCGCAT GGATCGTGGG GTGCGTCAGG TGATGACGGG GCAGAGTCTG
GATACCTTTG AGCGGTAG
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| Protein sequence | MVVLLDIAEP GQSAKPHEAR PEDMRRVVGI DLGTTYSLVA AIDQENKPGC IPLPEGGFAI
PSVVHYGADG GVLVGHAARE LAVSHPHATV ISAKRFMGRG LEDVQGEGKR TPYRLEAGEG
GMVRMDTGVG KVSPVEVSAE ILSYLKAQAE QALGGALYGA VITVPAYFDD AQRQATKDAG
RLAGLEVMRL VNEPTAAALA YGLEAGKEGM YAVYDLGGGT FDISILKLSK GVFQVMSTGG
DSALGGDDFD HALGDLFLRE MGVEQPSAEQ QQQVMRSARL AKEALTDAEQ VEVVIGDYGR
TLSKAEFEGA IDALVKRTGL PCRRALKDAG VKPGALQGVV LVGGSTRVPK VRAYVAELFQ
REPLSDLDPD KVVALGAALQ ADLLAGNRRG EDLLLLDVTP LSLGVETMGG LMEKIIPRNS
PTPTARAQEF TTFKDNQTAM VIQVVQGERE MAAENRSLAR FELRGIPPMV AGAARIRVTY
QVDADGLLTV SAEEMTTGVK QTVEVKPAYG LSDAEIEGML RDALSHGEAD MEARRLSEAR
VEVDRVLNAL DAALAKDVDL LSEAEVQGIK AAVEQLVGVA AGTDATAINQ GIEALDKATT
FFAQRRMDRG VRQVMTGQSL DTFER
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