Gene Mmc1_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3047 
Symbol 
ID4483110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3814161 
End bp3815129 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID639723794 
Productdipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 
Protein accessionYP_866944 
Protein GI117926327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0033788 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0365868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCCCC CCCATAATAG CCAAACCGTA CGCATGCTCA TGACAGCCGT TATGGATAAC 
AAGGGGCGCT TCAGCGTGCG TTACAATCCC CTGACGCTTC TAACTTCCAT TGCTCACCGC
TGGCTTCTGC ACGCCTTTCG CATTCGTCAG CGCGGTTATG CGGCTCCGCC GATCAAAGAC
GGCTTGCATG CCCACCAAGT ACAGTTCCCT ACCGCCAACG GTAAAAATCT CATAGGCTGG
TGGTGTGATC CAGGCCAAAG AGGTACAGTG GTCGTCATGA TGCACGGTTG GGGAGCCAAC
GCCTCCCACC TGTTTCCCTT GGCTCAAGCT TTTGTCGCTG CGGGCCACCC TGTGTTGCTG
TTTGACGCCC GCTGCCATGG GCTGAGCGAT GATGACGGTT TTGCCTCCTT ACCCCGTTTT
AGTGAGGATA TTTTGGCGGC ACTGCATTAT TTAGCCTCCC TTGGTCACAC CACTCCTCTG
CTGTTGGGGC ACTCCGTAGG AGCAGGCGCG GCCCTGTTGG CGGCAACCCG TTGGAAATCG
CTACAGGGCG TTGTGAGCAT CTCGGCGTTT GCCCATCCGC AGGAGATGAT GCGGCGCTGC
CTGCGCGGCT GGCACATCCC CTATTGGCCC ATTGGAGGAT GGCTGCTTCG CCACGTTCAA
CGCATCATCG GCCACCGATT TGATGACATT GCCCCCATCC ACACCATACG CCAACTGGAA
ATTCCTCTGC TGCTTATCCA TGGCGAAGCC GACACCACTG TGCCCGTGGC CGACGCCCAG
CGCCTGCATA GGGCCAACCC CCTATCCGAG CTGTTCGTGC TGCCCGAGGC CGGACATAAC
CGGGTGGAGG AGCTGCTGCC CCATACAGAG CAGCTACTGG CTTGGATCGC GGCATTGAAC
CCAACCGCAA TAAGCCGCGC GCAGAGCGAG CCCATCCCTA CCGTTTATTC CAAGAAAGTG
TCGCTATGA
 
Protein sequence
MHPPHNSQTV RMLMTAVMDN KGRFSVRYNP LTLLTSIAHR WLLHAFRIRQ RGYAAPPIKD 
GLHAHQVQFP TANGKNLIGW WCDPGQRGTV VVMMHGWGAN ASHLFPLAQA FVAAGHPVLL
FDARCHGLSD DDGFASLPRF SEDILAALHY LASLGHTTPL LLGHSVGAGA ALLAATRWKS
LQGVVSISAF AHPQEMMRRC LRGWHIPYWP IGGWLLRHVQ RIIGHRFDDI APIHTIRQLE
IPLLLIHGEA DTTVPVADAQ RLHRANPLSE LFVLPEAGHN RVEELLPHTE QLLAWIAALN
PTAISRAQSE PIPTVYSKKV SL