Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3017 |
Symbol | |
ID | 4483622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3773286 |
End bp | 3773759 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723764 |
Product | transcription elongation factor GreA |
Protein accession | YP_866914 |
Protein GI | 117926297 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAA AAGTACCCAT GACTTTAGAA GGTGCCCAGC AACTCAAAGA GGAGCTCAAG CGCCGCAAAA CCACCGACCG CAAACGTATT ATCGCGGCCA TTGAAGAGGC GCGAGCCCAT GGCGATCTGT CAGAAAATGC AGAGTACCAT GCCGCTAAGG AGCAGCAGAG CTTTAATGAG GGCCGTATCG CCAAGCTAGA AGGGATGTTA GCCAGTGCCG AGGTGATTGA TACCAGTCGC CTTAACTCTA GCCGCATTGT GTTTGGGGCC AAAGTAACTG TGATTGATGA AGATACGGAA GAGGAGTCCA CCTACCACAT CGTGGGCGAT GAAGAGGCGG ATTTGGAGAA GGGTAAGATC TCCATCTCCA GCCCCATGGC ACGGGGTATG ATTGGTAAGG AGGCCGGCGA CTCTATCGAG GTGCGCGCCC CCGGTGGTAC CCGCCATTTT GAGGTGGTTG AGATCACCTT TTGA
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Protein sequence | MNPKVPMTLE GAQQLKEELK RRKTTDRKRI IAAIEEARAH GDLSENAEYH AAKEQQSFNE GRIAKLEGML ASAEVIDTSR LNSSRIVFGA KVTVIDEDTE EESTYHIVGD EEADLEKGKI SISSPMARGM IGKEAGDSIE VRAPGGTRHF EVVEITF
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