Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2954 |
Symbol | |
ID | 4482028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3666426 |
End bp | 3667613 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723701 |
Product | hypothetical protein |
Protein accession | YP_866851 |
Protein GI | 117926234 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGTA GCCAAGGTAA CTATTTGTGG GGAGAATGGA TTGTGAAGAG TGCGCAACAG GTGTTGGTGG ATGTTCATTG GCAGGCAGAC GAGCTTGCGG AGCTGAGTGC CTTGCAACCA GCCTTGGTGC TGGTCTTTGG CAGCATGGCC TTTTTTGAAG AAGCATCGTT TATGCAACGC CTACAGCACT GTTTTCCTGG CGCGGCCTTG GTGGGGTGTA CCACCGCCGG TGAAATAACC GCCGATGGCG TTTTGGATGA CCACTGTGTG GTGACGGCCC TGCATTTTGA CGGGGTTACG GTGCAGGTGG CCCAGAGCGC GGTGGGGGCC ATGGAGCATT CCAGAGAAGC GGGGGTCAAT CTGGGTAGCA CGCTGCATCC CTACCATCCA CAAGCGGTCT TGTTGTTTGG TAAAGGGTTG GCCATCAATG GCAGTGGTGT GATTGAAGGT CTTATGCAAA GTTTGGGCAA CGATGTGCCC ATCACCGGGG GATTGGCAGG GGATGGTGGT AACTTTAAGC GCACCTTGGT GCTCAGCCCT GAAGGGGTGA GTGATGATCG TGTGGTGGCG GTGGGGCTAA GTGGTGAAGG GGTGCGCGTG GGTCATGGCT CCTTCGGTGG TTGGTCACCC TTTGGTCCCC CCCGCAAAGT CACCCGCAGT GAGGGCAATG TGCTGTTTGA GTTGGACGGC GAACCGGCCC TTAATGTGTA TAAAAAATAT CTGGATGTCT ATGCCAAAGA CCTGCCCGCC TCAGGGTTGC TGTTTCCCTT TGAAATGCTT AATGCCGACC ATGAACAGGT AGGCTTGATC CGTACCATTT TGGGGGTGGA TGAAGCGCAA GGTAGCTTGG TGTTGGCCGG AGATATTGAT GGAGATGGCT ATCTGCGTCT CATGCACGCC AATACCAATG GACTGGTAGG CGGTGCTGAA CAAGCGGCGA TTGCCACCCG CGAGCGGGCT GGTGCGCATA GCCAAGGGGG GGTTGCCATT CTGGTCAGCT GTGTGGGGCG TAAATTGGTG ATGGGGGATC AGGTGGATGA AGAGGTCGAA GTGGTGGCCT CCGTGCTGGG GGATGATGTG CTGTTGACCG GTTTTTACTC CTATGGCGAG ATCAGCCCTT TTTCATCAAC AACCGATTGT AAACTGCATA ATCAAACTAT GACGGTGACT TTTATCCATG AAGTTTAA
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Protein sequence | MLGSQGNYLW GEWIVKSAQQ VLVDVHWQAD ELAELSALQP ALVLVFGSMA FFEEASFMQR LQHCFPGAAL VGCTTAGEIT ADGVLDDHCV VTALHFDGVT VQVAQSAVGA MEHSREAGVN LGSTLHPYHP QAVLLFGKGL AINGSGVIEG LMQSLGNDVP ITGGLAGDGG NFKRTLVLSP EGVSDDRVVA VGLSGEGVRV GHGSFGGWSP FGPPRKVTRS EGNVLFELDG EPALNVYKKY LDVYAKDLPA SGLLFPFEML NADHEQVGLI RTILGVDEAQ GSLVLAGDID GDGYLRLMHA NTNGLVGGAE QAAIATRERA GAHSQGGVAI LVSCVGRKLV MGDQVDEEVE VVASVLGDDV LLTGFYSYGE ISPFSSTTDC KLHNQTMTVT FIHEV
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