Gene Mmc1_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2954 
Symbol 
ID4482028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3666426 
End bp3667613 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content55% 
IMG OID639723701 
Producthypothetical protein 
Protein accessionYP_866851 
Protein GI117926234 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGTA GCCAAGGTAA CTATTTGTGG GGAGAATGGA TTGTGAAGAG TGCGCAACAG 
GTGTTGGTGG ATGTTCATTG GCAGGCAGAC GAGCTTGCGG AGCTGAGTGC CTTGCAACCA
GCCTTGGTGC TGGTCTTTGG CAGCATGGCC TTTTTTGAAG AAGCATCGTT TATGCAACGC
CTACAGCACT GTTTTCCTGG CGCGGCCTTG GTGGGGTGTA CCACCGCCGG TGAAATAACC
GCCGATGGCG TTTTGGATGA CCACTGTGTG GTGACGGCCC TGCATTTTGA CGGGGTTACG
GTGCAGGTGG CCCAGAGCGC GGTGGGGGCC ATGGAGCATT CCAGAGAAGC GGGGGTCAAT
CTGGGTAGCA CGCTGCATCC CTACCATCCA CAAGCGGTCT TGTTGTTTGG TAAAGGGTTG
GCCATCAATG GCAGTGGTGT GATTGAAGGT CTTATGCAAA GTTTGGGCAA CGATGTGCCC
ATCACCGGGG GATTGGCAGG GGATGGTGGT AACTTTAAGC GCACCTTGGT GCTCAGCCCT
GAAGGGGTGA GTGATGATCG TGTGGTGGCG GTGGGGCTAA GTGGTGAAGG GGTGCGCGTG
GGTCATGGCT CCTTCGGTGG TTGGTCACCC TTTGGTCCCC CCCGCAAAGT CACCCGCAGT
GAGGGCAATG TGCTGTTTGA GTTGGACGGC GAACCGGCCC TTAATGTGTA TAAAAAATAT
CTGGATGTCT ATGCCAAAGA CCTGCCCGCC TCAGGGTTGC TGTTTCCCTT TGAAATGCTT
AATGCCGACC ATGAACAGGT AGGCTTGATC CGTACCATTT TGGGGGTGGA TGAAGCGCAA
GGTAGCTTGG TGTTGGCCGG AGATATTGAT GGAGATGGCT ATCTGCGTCT CATGCACGCC
AATACCAATG GACTGGTAGG CGGTGCTGAA CAAGCGGCGA TTGCCACCCG CGAGCGGGCT
GGTGCGCATA GCCAAGGGGG GGTTGCCATT CTGGTCAGCT GTGTGGGGCG TAAATTGGTG
ATGGGGGATC AGGTGGATGA AGAGGTCGAA GTGGTGGCCT CCGTGCTGGG GGATGATGTG
CTGTTGACCG GTTTTTACTC CTATGGCGAG ATCAGCCCTT TTTCATCAAC AACCGATTGT
AAACTGCATA ATCAAACTAT GACGGTGACT TTTATCCATG AAGTTTAA
 
Protein sequence
MLGSQGNYLW GEWIVKSAQQ VLVDVHWQAD ELAELSALQP ALVLVFGSMA FFEEASFMQR 
LQHCFPGAAL VGCTTAGEIT ADGVLDDHCV VTALHFDGVT VQVAQSAVGA MEHSREAGVN
LGSTLHPYHP QAVLLFGKGL AINGSGVIEG LMQSLGNDVP ITGGLAGDGG NFKRTLVLSP
EGVSDDRVVA VGLSGEGVRV GHGSFGGWSP FGPPRKVTRS EGNVLFELDG EPALNVYKKY
LDVYAKDLPA SGLLFPFEML NADHEQVGLI RTILGVDEAQ GSLVLAGDID GDGYLRLMHA
NTNGLVGGAE QAAIATRERA GAHSQGGVAI LVSCVGRKLV MGDQVDEEVE VVASVLGDDV
LLTGFYSYGE ISPFSSTTDC KLHNQTMTVT FIHEV