Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2947 |
Symbol | |
ID | 4482021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3652999 |
End bp | 3653952 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723694 |
Product | cytochrome-c peroxidase |
Protein accession | YP_866844 |
Protein GI | 117926227 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0431502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTGGT TTGCGCGTAA ATGGGGGGTT GGGTTGCTCC TGTGGTGCAT GTTTGCACTC TCTTCGTTGG CGGCGGCGCA AGAGCCGTTG GCCCCTATCC CTGATGGGCA AGATTGGCAG ACCGATAAAG CACAGTTGGG GGGCCAACTG TTTCATGATC CCCGATTTTC TGAGGACAAC ACTGTTTCGT GTGCAACGTG TCACCCCTTG GAACAGGGGG GAATGGATGG CCAGGTTCGC TCGGTGGGCG TGTTGGGTAG AGAAGGGCTC GTCAATACGC CAACCGTCTT TAATAGTAGC CTCAACTTTG CACAAATGTG GGATGGCCGG GCCGAAGATT TGATGGCCCA AATCGACTTT CCCCTATTTG CTACCCATGA AATGAATAGC TCTTGGGATA AGGTGCTGCC CAAGCTACGA CAAAATGCCG ATTACCTTCG CCAGTTTGCG CTCCTTTATA CCGATGGCAT GAGCGTCGCC AACATTAAAG ATGCCATCGT CCATTTTGAA CGCAGCCTCA TTACCCCCAA TGGGCGCTTT GATCGTTGGT TGAAAGGGCA AGAAGATGCC CTGACTTTGC GCGAGAAGCA GGGGTACAGC CTGTTTAAGG GGTATGGGTG CAGTGCTTGC CACCAAGGTC GTGGGGTGGG GGGCAATTTT TATGAAAAAA TGGGTGTGAT GGGAAACTAT TTTCGCGATC GAGGCGAGGT TACCCTAGCC GATTATGGCC GCTATAACCA TACCCGCCGC GAAGAACACC GCTATGAGTT TAAAGTTCCC TCTCTACGCA ATGTGGCCCT GACGGCCCCC TATTTTCATG ATGGCTCAGC CAAAACACTG GAAGACGCGG TGGAGGTGAT GGGGCGTTAT CAATTGGGGC GGGAGATCCC TCCAGAGGAT GTGGCAAAGA TTGTGGCCTT TTTAAAAACC CTCACCGGCG CCCGGTTGGA GTAA
|
Protein sequence | MEWFARKWGV GLLLWCMFAL SSLAAAQEPL APIPDGQDWQ TDKAQLGGQL FHDPRFSEDN TVSCATCHPL EQGGMDGQVR SVGVLGREGL VNTPTVFNSS LNFAQMWDGR AEDLMAQIDF PLFATHEMNS SWDKVLPKLR QNADYLRQFA LLYTDGMSVA NIKDAIVHFE RSLITPNGRF DRWLKGQEDA LTLREKQGYS LFKGYGCSAC HQGRGVGGNF YEKMGVMGNY FRDRGEVTLA DYGRYNHTRR EEHRYEFKVP SLRNVALTAP YFHDGSAKTL EDAVEVMGRY QLGREIPPED VAKIVAFLKT LTGARLE
|
| |