Gene Mmc1_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2947 
Symbol 
ID4482021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3652999 
End bp3653952 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content53% 
IMG OID639723694 
Productcytochrome-c peroxidase 
Protein accessionYP_866844 
Protein GI117926227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0431502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGGT TTGCGCGTAA ATGGGGGGTT GGGTTGCTCC TGTGGTGCAT GTTTGCACTC 
TCTTCGTTGG CGGCGGCGCA AGAGCCGTTG GCCCCTATCC CTGATGGGCA AGATTGGCAG
ACCGATAAAG CACAGTTGGG GGGCCAACTG TTTCATGATC CCCGATTTTC TGAGGACAAC
ACTGTTTCGT GTGCAACGTG TCACCCCTTG GAACAGGGGG GAATGGATGG CCAGGTTCGC
TCGGTGGGCG TGTTGGGTAG AGAAGGGCTC GTCAATACGC CAACCGTCTT TAATAGTAGC
CTCAACTTTG CACAAATGTG GGATGGCCGG GCCGAAGATT TGATGGCCCA AATCGACTTT
CCCCTATTTG CTACCCATGA AATGAATAGC TCTTGGGATA AGGTGCTGCC CAAGCTACGA
CAAAATGCCG ATTACCTTCG CCAGTTTGCG CTCCTTTATA CCGATGGCAT GAGCGTCGCC
AACATTAAAG ATGCCATCGT CCATTTTGAA CGCAGCCTCA TTACCCCCAA TGGGCGCTTT
GATCGTTGGT TGAAAGGGCA AGAAGATGCC CTGACTTTGC GCGAGAAGCA GGGGTACAGC
CTGTTTAAGG GGTATGGGTG CAGTGCTTGC CACCAAGGTC GTGGGGTGGG GGGCAATTTT
TATGAAAAAA TGGGTGTGAT GGGAAACTAT TTTCGCGATC GAGGCGAGGT TACCCTAGCC
GATTATGGCC GCTATAACCA TACCCGCCGC GAAGAACACC GCTATGAGTT TAAAGTTCCC
TCTCTACGCA ATGTGGCCCT GACGGCCCCC TATTTTCATG ATGGCTCAGC CAAAACACTG
GAAGACGCGG TGGAGGTGAT GGGGCGTTAT CAATTGGGGC GGGAGATCCC TCCAGAGGAT
GTGGCAAAGA TTGTGGCCTT TTTAAAAACC CTCACCGGCG CCCGGTTGGA GTAA
 
Protein sequence
MEWFARKWGV GLLLWCMFAL SSLAAAQEPL APIPDGQDWQ TDKAQLGGQL FHDPRFSEDN 
TVSCATCHPL EQGGMDGQVR SVGVLGREGL VNTPTVFNSS LNFAQMWDGR AEDLMAQIDF
PLFATHEMNS SWDKVLPKLR QNADYLRQFA LLYTDGMSVA NIKDAIVHFE RSLITPNGRF
DRWLKGQEDA LTLREKQGYS LFKGYGCSAC HQGRGVGGNF YEKMGVMGNY FRDRGEVTLA
DYGRYNHTRR EEHRYEFKVP SLRNVALTAP YFHDGSAKTL EDAVEVMGRY QLGREIPPED
VAKIVAFLKT LTGARLE