Gene Mmc1_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2928 
Symbol 
ID4481980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3618024 
End bp3618617 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID639723671 
Productplasmid pRiA4b ORF-3 family protein 
Protein accessionYP_866825 
Protein GI117926208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTGAAA TGGCAAATAA AATCAGAAAG CCTAAAGGCA TCACGCTCAA AATCACTCTG 
GAGAGGATTC GACCACCGAT TTGGCGCAGG ATCCTTGTGC TGGATTCTTT TACCCTATTT
GATCTGCATG AACTTATCCA AATTTCAATG GGATGGGATA ATAGTCATCT CCATGAGTTT
CAAGTGGGTG AAAGGAACTA TGGTGTTCCT GATCCTGAAT TTGATAGCTT TGCTGACATC
CTACCCGAGG ATCAGATCAT GTTACGTACA GTCTTGGGAA GAGGGGTGAA AAAATTTTCT
TATGTGTACG ACTTTGGCGA TAACTGGCAA CACAAAATCG AAATAGAAAA AGTAGAACCA
GTATCGCCAG ACAGTGTGTA TCCATGTCTA TTGACAGGGA AGCGGGCTTG CCCGCCGGAT
GATATCGGTG GTGTCTGGGG CTATGCAGAA TTTCTTGAAG GCTGGAAAGA TCCTGAACAT
CCCAGCTATG AGGAGTATCA AGAATGGGTT GTAGAAGATT TTGACCCTGC TGTATGTGAT
AAAGATACTA TCAATCAGCT TCTTGTGAGA TGGGGGCGGA ATTATATTGG TTGA
 
Protein sequence
MCEMANKIRK PKGITLKITL ERIRPPIWRR ILVLDSFTLF DLHELIQISM GWDNSHLHEF 
QVGERNYGVP DPEFDSFADI LPEDQIMLRT VLGRGVKKFS YVYDFGDNWQ HKIEIEKVEP
VSPDSVYPCL LTGKRACPPD DIGGVWGYAE FLEGWKDPEH PSYEEYQEWV VEDFDPAVCD
KDTINQLLVR WGRNYIG