Gene Mmc1_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2853 
Symbol 
ID4484104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand- 
Start bp3558084 
End bp3558734 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID639723598 
Producthypothetical protein 
Protein accessionYP_866752 
Protein GI117926135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.14989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.354963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTTC CTTATCTTCA TAAGGCGGAT ATTGAGGCGG CAGCCAATGA GTTGCTTATG 
AGCTACCATT ACAAGTTTGG AATGGAAGAG GCTCCGCCTG TGCCTGTAGA GGAAATCCTA 
GAATCCTTGT TGGGGTTGGC TTTGGAGTTT GGCGATCTTG ATGCCCTGCT TAATAAAAAG 
GGGGTGCTGG GTGCGACTTG GGTGAATGAG CGTCGTGTGG TGATCAATGA GATGTTGGAT 
CCAACAGAGG ATCCCTCTGT GGAGGGGCGC TACCGTTTCA CTCTGGCCCA TGAACTGGGT 
CACTGGCAGT TGCATCGCCA CCTGAGTTTT GGTGAGGATG GGCAGACCAT TTTATGCCGT 
TCGAAATCCA AGAAGGATCC CATGGAGTGG CAAGCGGACT GTTTTGCTGG CTATCTGCTG 
ATGCCCAAGA AGGATGTGAT CCGTTCATGG GAGGAAGTGT TTGGTACCCA TGAACCTTAT 
GATGCATCGG ATGAGCTCTA CAATATGCAG AGCCGCTTTG ATGAGGCTGG TGAAGCGTCA 
GAGGCGGGGT TAGTGGTTGA TCTGGCCAGG GATCTGGCCG AGGTGTTTCA GGTATCCGGT 
TTGGCGATGC AGATTCGCCT CGTTGATATG GGGTTGCTGA AGCTGCGATA G
 
Protein sequence
MRVPYLHKAD IEAAANELLM SYHYKFGMEE APPVPVEEIL ESLLGLALEF GDLDALLNKK 
GVLGATWVNE RRVVINEMLD PTEDPSVEGR YRFTLAHELG HWQLHRHLSF GEDGQTILCR 
SKSKKDPMEW QADCFAGYLL MPKKDVIRSW EEVFGTHEPY DASDELYNMQ SRFDEAGEAS 
EAGLVVDLAR DLAEVFQVSG LAMQIRLVDM GLLKLR