| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2766 |
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| Symbol | |
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| ID | 4483905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3479913 |
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| End bp | 3482075 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723511 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_866665 |
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| Protein GI | 117926048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.172125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATT GGACTCCATA TCTCGATTTC AATGATGCGG GTGGACAGCA GGAGTTTTCC
TCTGTTGCAG AACAGCATCA TGAAAAGGAG GAGATAAAAG CACGTTTGCA GAGCCAGATT
GAGTCGGTGC TGTATCACCT TTTGCCTGCC GGGAAGGTTC GTCATGGGCA GTTCTTCATC
GGAGATGTGG AGGGCAACCC CGGTGAGAGC ATGAAGGTTG AGCTGACGGG AGAAAAGGCC
GGGGTCTGGT ATGACCATGC TGCGGGTTCG GGTGGCGACA TCCTGGACCT GTGGGCCCGG
TCACGAGGCA TGGACACCCG CACCCAGTTC CGTGACGTCA TGGATGATGT GCGCGGCTGG
CTGGGAGAGT CCGTGAGATT ACCACCTGTA TCGATGCAAC CCACTCAACG GCGTGAACCC
CCCATGGATG AGTTGGGGCC CCATACCGGT AAGTGGGACT ATTTCGATAC CAATGGCCAA
CTACTGGTCT GTGTCTACCG TTACGATCCT CCGGGCCGCC GAAAGGAGTT TCGGCCCCTG
GATGTGCGCA CCGGCAAGTG GCAGTCGCCA GCGGTGACGC CCCTCTACAA CCTACCTGGA
ATCATGCAAG CCGCTGAGGT GGTGCTGGTC GAAGGGGAAA AGAGCGCCCA GGCGCTCATC
GATGCGGGAA TCCCGGCGAC CACATCTCTA GGCTCCAAAG GGCAGATCAA CCGCGCTGAT
TGGAGCATTC TCCAGGGTAA ACGGGTAATC ATCTGGCCCG ACCGAGACAA GGCAGGATGG
GAGTACGCCC AATTGGCATC ACAGGCAGCC AGAAACGCGG GCGTTCGGGA AGTGTCCATT
CTCACACCGC CAGAGGGAAA ATCTGAAAAA TGGGATGCTG CTGATGCCGT GGCTGAGGGG
ATGGATGTGC GTGCGTTTAT ACACCACGCA CTTCGACAGG AGCCAAAAGG TAGAAAACGT
CGCATCCGAT TGATGGATTG GACGCTGGAT CGCTATGAGG GGCCACCCCC TCATCGTGAA
TGGCTGATAG AAGGCGTTCT GCCACTGGGG GTGCCCGGTA TGTTTGCAGC CATTGGTGGC
GCAGGGAAAA GCATGCTGTT AATGGATCTG GCTGCCAAAG TGGCGCTTTC CGAAAGTGGA
AACCCCATCC CGCTGGAAGC GCTTGGTGGT CCGATAGTGC CTGCAACCGG CACCGCTGTC
ATGCTAACCG CAGAGGATGA TCACGCAGAG GTGCATAGAC GTCTCTTTGA GGTGTTACCA
GGACGGCCCA ATCCCAAACG GCTGATTATT GTGCCCATGC CCAATGCGGG CGGTACGTTG
CCGCTGATAA GCATGAGTCG TGAGGGACCA ATCCTGTCGG AAGAGTTTCA TGACATTAGG
GAGGAGCTTT TGGAGATCCC CAACCTCCGG CTGGTGGTCA TTGATCCGCT GCAGAACTTT
GCAGGGGGTG ATGTTAACAG TGACCCCGCC GCTGGGGCGC TCTTCTTTTC TGGTTTGGGA
CGTATCGCTG CCGAGACCGG TGCTACCGTA CTGGCAACAC ACCATTTCAA GAAAAACAGT
GGTAAGACCA TCGGAACTGC TGCAGAGGCG CGAGAGGCCA TTCGTGGCAC CACGGCGCTT
GTCGATAGCG GTCGGTGGTC CTATGCCCTC TGGGAGGTTG AGGATTCTGA AGCCAAAAAG
GTTTGTAAAC TGATTGGCCA GCGCTTTCAG AGAGAGAGTG TCTACCGAGG CGCTGTTGTA
AAGAGCAACT GGCCTACAGA CAAGACGGTA CGGATCTATG CCCGTAATCC CAACAGTGGG
CTCTTGTCTG ACCGGACGAT GGATCTTGAG CGACTGGGAT CAAAGCAGCC TGAGCTGATG
GATCTATTGG TTACAGCCGT GGGAAACGCT GCATCTGGTG GGCAGCCATA TACCAAAACA
GGGGGCAACG GGCTCTACGA ACGGCGCTCA GAGTTGCCAG ATGATCTGCG CAGCGTCGGA
AGAGACAGGT TGGTGCATAT GACTGACCTG CTACTACAGC TGGGGAAAAT TGTTCTCTGC
GTTGCTGGGG ACAGCAAATT GAAAAAATAC CTGGATGTTC CCGATGGTGA ATTTGCTGTT
GGCGTCGGCC AATTTCAGGT CGGTGCGGGC TCCCAGAGTC ACAGCATACA GGGGGGTGAA
TAG
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| Protein sequence | MNNWTPYLDF NDAGGQQEFS SVAEQHHEKE EIKARLQSQI ESVLYHLLPA GKVRHGQFFI
GDVEGNPGES MKVELTGEKA GVWYDHAAGS GGDILDLWAR SRGMDTRTQF RDVMDDVRGW
LGESVRLPPV SMQPTQRREP PMDELGPHTG KWDYFDTNGQ LLVCVYRYDP PGRRKEFRPL
DVRTGKWQSP AVTPLYNLPG IMQAAEVVLV EGEKSAQALI DAGIPATTSL GSKGQINRAD
WSILQGKRVI IWPDRDKAGW EYAQLASQAA RNAGVREVSI LTPPEGKSEK WDAADAVAEG
MDVRAFIHHA LRQEPKGRKR RIRLMDWTLD RYEGPPPHRE WLIEGVLPLG VPGMFAAIGG
AGKSMLLMDL AAKVALSESG NPIPLEALGG PIVPATGTAV MLTAEDDHAE VHRRLFEVLP
GRPNPKRLII VPMPNAGGTL PLISMSREGP ILSEEFHDIR EELLEIPNLR LVVIDPLQNF
AGGDVNSDPA AGALFFSGLG RIAAETGATV LATHHFKKNS GKTIGTAAEA REAIRGTTAL
VDSGRWSYAL WEVEDSEAKK VCKLIGQRFQ RESVYRGAVV KSNWPTDKTV RIYARNPNSG
LLSDRTMDLE RLGSKQPELM DLLVTAVGNA ASGGQPYTKT GGNGLYERRS ELPDDLRSVG
RDRLVHMTDL LLQLGKIVLC VAGDSKLKKY LDVPDGEFAV GVGQFQVGAG SQSHSIQGGE
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