| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2717 |
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| Symbol | |
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| ID | 4482569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3434831 |
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| End bp | 3438211 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639723462 |
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| Product | hypothetical protein |
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| Protein accession | YP_866616 |
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| Protein GI | 117925999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00375535 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGACGGC ACTCCGGCCA TATTCTGTTT GCCGCCTCGG ACCTAAACGG GTTTCTGGGA
TGTCGGCACA GCACGTTCTT GGATCTGATG GATCTGGACG AGCGGCTGCC CCGTGCTGAG
GTGAGTGCGC AGGATAGGCT CATCCAAGAA CGTGGCCACG AGCATGAGGC TGAGTATCTG
GAGTCGCTGA AGCGGTCAGG GCTCAGCGTC GTTGAGATCC CCAGTGAAGG GGGCTTGACT
GATCGGGTTC AGATGACTGC CGATGTGATG GCGGATGGGC CAGACATTAT TTATCAAGCT
GGATTTTTGG ATGGCCAATG GCATGGCTAT GCTGATTTTC TGCAAAAAAC AGATCGTCCC
TCAGGGCTGG GCCCTTTCAG CTATGAGGCA GTAGATACCA AGCTGACTAA ACACCCAAAG
CCAAAGTTTG TCATCCAGCT CTGCCTCTAT TCTGATTTCA TCGCAAAGAT GCAAGGAACG
CGGCCTCAGG GTATGTCGCT GGTGCTGGGA GATCTCTCCC AGGTCCATCT GCGCTTTGAC
GACTTCGCCT ACTACCACGG CATCATTCGG CGGCGGTTCG AGGAGTACGT CTCCGAACCC
CCGGAAAGAT CCAGGTCCGA GCCCTGCGGG TTCTGTGAGC TGTGCAAGTG GCGCGACCTC
TGCGGAGAGC AGTGGGAGCG TGAAGACCAC TTGAGCCAGG TGGCCAATAT CCGGCGCAGC
CAGATCCTGA AGCTGGAGTC CGCCGGAATC GCCACGGTTC AGGCCCTGGC CCACATGGAC
GATGATGCCA CCGTACCCAG CTTGGCCCAG GAAACGCTGG AGAAGCTGCG CGCCCAGGCC
CGGCTTCAGG TTGCCAAGCG GGAGACCGGG GAGAACCGGG TGGAAACCCT TCCATCCGTC
CCGGGCCGGG GATTCGCCCG CATGCCGAGG CCTGCCGAGG GAGACCTGTT CTTCGACATG
GAGGGGGACC CCCTCTACCC GGATGGGCTG GAGTATCTGT TCGGCTTCTA CTTCGTCAGC
GAGGGCAGGC CCGTCTTCAA GCCCTTCTGG GCCCATGACC ATGAGGAAGA GAAGCGGACC
TTCCAGGCGG TGATGGATTT TCTCGTGGCG CATCTTCGGG AACATCCCAG CGCGCACGTC
TACCATTACA ACCACTACGA GGAGACCGCC CTCAAGCGGT TGGCCTCCCG GTACGGCGCC
CGCGAGGGTG AGGTGGATGA CCTGCTGCGT GGCCGGAAGC TGGTGGACCT GTACAAGGTG
GTGCGGGAGG CAATCCGGGT TTCCGAGCCC AGCTACTCCA TCAAGAACCT GGAAACGTTC
TACATGGAGA AGCGCAGCGC TGAGGTGGCC ACCGCTGGCG ACAGCATCGT GGTGTACGAG
ACCTGGCGGA AAACCCGAGC CGCCGGCCTC CTGCAGCAGA TCAGCGACTA CAACGAGGAC
GATTGCCGCT CCACCCTGCT GCTTCGGGAC TTGCTGGCCG GATTGCGGCC GGACGACCTG
CCATGGTTCG ACCTGACGGC AGAGGTCCCA CCCGAGGAGA AGCTGGCGGC CCAACTGGAA
GCGGAGGAGA CGCGCCAGCG CTACGAGCAG AGCCTGACCG GCGGCGAGAA GCGTCCCGAC
CATGAATTCC GGGAACTGGT GGCGCAACTG CTGGAGTTTC ACCGCCGGGA GGCCAAGCCC
CAGTGGTGGG CCATGTTCGA CCGCCAGGAC CGGGCCGACG AGGATCTGGT GGATGACGCC
GAGTGCCTGG GAAGTCTGAG GGCGGATCGA AAACAGCCCC CCTACAAGGA CAAGCGATCC
ACGGTCTTCA CCTACCGGTT CCCGCCCCAG GAAACCAAGC TGCGGGCCGG GGATTCCTGC
CTTCGCGCCG ATACCCTGGA GCGCGCCGGG GAGATCGTGG AGCTGGATAT GCGGTCCCAA
CGGGTGCGGA TCAAGAAGGG TGCGAAAGGA GGACCGCTGC CGGAGGCGCT CTCCATCACC
CCCACCGGTC CCATCGACAA CAAGGTGCTG CGCAATGCGG TGTACCGGTT TGCCGACGCC
ATCATCGCAG AGAATGGACG GTTCCAGGCA CTGACGGCTT TCCTTCGGCG GGAGATGCCC
TCCATTGCCA ATCATGTGGC AGGCAGCCCC ATCGTCCCGG AAGACGACAA CCTGCTGACC
GCCACGATCC GGGCGGTCTC CGGCCTGCAG GAGAGCTACC TGTTCATCCA GGGGCCGCCC
GGAGCCGGGA AGACCTACAC ATCCTCCCAT GTGATCGTGG AGCTGCTGAG GAGTGGGAAA
AAGATCGGCA TCTCCTCCAA CTCCCACAAG GCGATCAACA ACCTGCTCTC GGGAATCGAG
AAGGCGGCCA TCCAGGAAGG GCTGACTTTC CGGGGCCAGA AGAAATCGAC GGCCCAGAAT
GCCGACTCCC TGTTCCAGGG GGAGATGGTC GAGAATGTTT ACGACAGCAA GAACATCAAC
CTGGACTCGG ACCTGATCGC CGGGACCGCC TGGCTGTTTG CCCGGGATGA GATCGACGAG
GCCCTGGATT ACCTCTTCAT CGACGAAGCC GGGCAGGTCT CCCTGGCCAA TCTGGTGGCC
ATGGGACTCA GCGCCAAAAA CATCGTCCTG GTGGGTGACC AGATGCAACT GGGACAGCCC
ATCCAGGGCG TCCACCCCGG GCTTTCCGGC ATGTCCATTC TGGACTACCT GTTGGAAGGC
GAGTCCACCA TTCCGGCGGA CCGGGGGATC TTCCTGGGCA CGACGTGGCG GATGCACGAG
AACGTCTGCC GGTTCATCTC CGATGCGGTC TACGACGGAC GGCTGCACCC CGAGCCGGGC
ACCCGGAACC AGGCGCTCAT TCTCTCCGAA TCCGCACACC CGGCGCTCCA GCCCAACGGC
ATCCGGTTCA TCGAGGCCCG GCATGTGGGG TGCTCCCAGA AAAGTGAGAT GGAAGGCGAA
ATCGTCCGGG ATTTGATCGC CAGCCTGACC GCCCAGCGAT ACAGGGACCG CGATGGGCAG
GAACGTCCCC TCGGACTCGA CAACATCCTG GTGGTCACCC CCTACAACGT TCAGGTGAAC
CATCTCCGGG AGGTGCTCCC CGAGGGCGCG CAGGTGGGGA CCGTGGACGA GTTCCAGGGC
CAGGAGGCAG AGGTGGTCAT CATCTCCATG GTGACCTCCG GCGCGGAGGA CCTGCCCCGG
GACATCGAGT TCCTCTACAG CAAGAACCGG CTCAACGTGG CCATCTCCCG GGCGCGGACG
CTGGCCTTGA TCGTGGCCAA CCCGAACCTG CTGGAGATTC CCTGCAAAAC GGTGGAACAG
ATGCGGTTGG TGAACACGCT GTGCTGGGCG CGGCAATACT CTGAACGGCC AATGGCGGAA
ACGGAACGGG CCACATGCTG A
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| Protein sequence | MRRHSGHILF AASDLNGFLG CRHSTFLDLM DLDERLPRAE VSAQDRLIQE RGHEHEAEYL
ESLKRSGLSV VEIPSEGGLT DRVQMTADVM ADGPDIIYQA GFLDGQWHGY ADFLQKTDRP
SGLGPFSYEA VDTKLTKHPK PKFVIQLCLY SDFIAKMQGT RPQGMSLVLG DLSQVHLRFD
DFAYYHGIIR RRFEEYVSEP PERSRSEPCG FCELCKWRDL CGEQWEREDH LSQVANIRRS
QILKLESAGI ATVQALAHMD DDATVPSLAQ ETLEKLRAQA RLQVAKRETG ENRVETLPSV
PGRGFARMPR PAEGDLFFDM EGDPLYPDGL EYLFGFYFVS EGRPVFKPFW AHDHEEEKRT
FQAVMDFLVA HLREHPSAHV YHYNHYEETA LKRLASRYGA REGEVDDLLR GRKLVDLYKV
VREAIRVSEP SYSIKNLETF YMEKRSAEVA TAGDSIVVYE TWRKTRAAGL LQQISDYNED
DCRSTLLLRD LLAGLRPDDL PWFDLTAEVP PEEKLAAQLE AEETRQRYEQ SLTGGEKRPD
HEFRELVAQL LEFHRREAKP QWWAMFDRQD RADEDLVDDA ECLGSLRADR KQPPYKDKRS
TVFTYRFPPQ ETKLRAGDSC LRADTLERAG EIVELDMRSQ RVRIKKGAKG GPLPEALSIT
PTGPIDNKVL RNAVYRFADA IIAENGRFQA LTAFLRREMP SIANHVAGSP IVPEDDNLLT
ATIRAVSGLQ ESYLFIQGPP GAGKTYTSSH VIVELLRSGK KIGISSNSHK AINNLLSGIE
KAAIQEGLTF RGQKKSTAQN ADSLFQGEMV ENVYDSKNIN LDSDLIAGTA WLFARDEIDE
ALDYLFIDEA GQVSLANLVA MGLSAKNIVL VGDQMQLGQP IQGVHPGLSG MSILDYLLEG
ESTIPADRGI FLGTTWRMHE NVCRFISDAV YDGRLHPEPG TRNQALILSE SAHPALQPNG
IRFIEARHVG CSQKSEMEGE IVRDLIASLT AQRYRDRDGQ ERPLGLDNIL VVTPYNVQVN
HLREVLPEGA QVGTVDEFQG QEAEVVIISM VTSGAEDLPR DIEFLYSKNR LNVAISRART
LALIVANPNL LEIPCKTVEQ MRLVNTLCWA RQYSERPMAE TERATC
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