Gene Mmc1_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2564 
Symbol 
ID4483631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3272181 
End bp3272495 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content51% 
IMG OID639723311 
ProductXRE family transcriptional regulator 
Protein accessionYP_866469 
Protein GI117925852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.229485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG GCTACAACCC TCTTCCCCTC AATATTAAGG ACGAGTTAAC CCACGCCCGA 
CTGAAGCCGG GCTTTAGTGA GGCCTATGAT GCTTTGGAAG ATGAGTTCCA GGCTTTACGA
ACCTTCCTGT CGGCCCGCAA GGAAGCAGGG CTTACCCAGG AAGAGATTGC CAAACGAATG
GGCACCACCA AAAGTGCCGT ATCCCGTCTG GAATCTTCCC TGGGCGATCA TAAACACTCT
CCATCTATTG CCACTCTGCG TAAATATGCC AAAGCGGTTG GCTGTAAGTT GGAGATCAAG
CTGGTTCCTC AGTAA
 
Protein sequence
MADGYNPLPL NIKDELTHAR LKPGFSEAYD ALEDEFQALR TFLSARKEAG LTQEEIAKRM 
GTTKSAVSRL ESSLGDHKHS PSIATLRKYA KAVGCKLEIK LVPQ