| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2550 |
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| Symbol | |
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| ID | 4483865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3256683 |
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| End bp | 3258695 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723298 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_866456 |
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| Protein GI | 117925839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.507483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0818134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG ACCTGCTGCT TGATTGTGCG CTTAAGCTTC AACAAGCCGG TGAAGTCGAG
CCTGCCATTG CGTGCTACAC CAAGCTTTTG CAGCATGATC CCAACCATTT TATCGCTTGG
GTCAACATCA GTTTACTTCA CATGCAGGCA GATGATTTGG CCAAAGCGGT GGATGGCTAT
CAAAAAGCCA TCGCCCTTCA ACCCCACCAT CCGATTCCTT ATTCCCACAT GGGCATTCTT
CTTCGCAAGC AAGGCCGCCA CCAGGAAGCA TTGGCCCACT ATCATAAAGC GCTTACCCTG
GATCCCAATC AGGTGGATTT TCATAACAAC CTGGGCAACC TGTTACGGGA TATGCAACAG
CATAAAGAGG CCATTGAGGT CTACCAGCAA AGTCTGAAGA TCAACCCCCA ACAGATTGAA
GTCTACAACA CCATAGGCAC CATTGAGGTG GAGCTGGGCC GCCTTGGAGC TGCCATGCAA
CACTATTTAA ACGCCCTGAT AGCCCAACCG GCTGCAGAAA CCATCTATAG TGCCATGGGG
CTCACACTGG AGTCCCTTTG CCAACACATG CAGTCATCTG AAGATCACCT GCACACTTGG
CTGGAAAACT GGCTTTCCCA AATGCCGGAC AATCCCGTTG AGCACGCCAT CTTACGTTTC
AAGGTGAAGC AGATTTTGGG ATTGGCATTG GAACAGCCTC ATCAGCAAAT CATAGAGGCG
CTCCCAACCA CCCGTCTGAA AAGTCCTGTT GATCCATCCA AACAGCCCAC CCAGCCTCCA
AGGCATGCTT CGACACATAG GCGCAAGGAT ATGGTGGGCC TGATCAACCT TGCCCGCTCT
GGATCTGGAT ACATCCATAG TCTTTTGGAT CACCATCCTC AGATAAGCAC GACCCCTGGC
GTCTATATGA GCGGCTATTT TGGACGGCAT GTATGGCAAC AACTAACGGC ACATGGGTTT
GGCCAGATTG CGGAACAGTT TGCCACCCTT TATGAGGTTC TGTTCGACGC GCGCAGCACG
GTCAAACCTC CACCTCCGTT TATTGGCGAT GTACTTGGCA GCCGCGTGGG TGTAGGGGTG
GCCGAGGGTT TCGACCGGAT GGGACCGCAA CGAAACGAAG CCTTGAAGCT CAATAGAGAT
GCGTTTGTCG CGGAGCTTCA GCGACGTATT CATGCTCAAG CCTATGTGGA TCAGGGATCT
GTCTTTGAAC TGGCTCATGA TGCGTATGAA ACCGTTTTGG CGCGCAACCC CCAACAGATG
AAGGTGATTT TCAACCATAT CCACCAAATC GACCCCTTTA GCCTAAGCAA TCTGCTTAAA
CATCGACCAG ATTTGCGCAT GCTGGTGATT ATACGCAACC CTGTTCAATC CTGTGAATCG
TGGTGTATCA AGGCCGATTC CGATCGTTTG GCACCCACGC CATATGCCCT TTATATGCAC
ATTGTCAGCA AATTGAATCG CACCTTGGTG GATATCAACC ATCCCCTGTT TGCCCGACGC
GATGCCGTTG CCATTCGACT TGAAGATCTG AAAGTGGCGT TACCAAGCAC CATGGAGGAT
GTCAGTCACT GGATGGGGAT TGAATTTGCC GAAACCATGC TGCAATCGAC CATGCAGGGG
CTTGAGTGGT GGGGGGATCC AAGCAGCGTT TTATATGGCA AAAAGCAGAC CGCCAACCAT
GGTTCACAGG ACCCAACCAA GGACAAGGCT GGACGACTTT TCAGCGATCA GGATCGCTAT
ATTCTCAATG TGCTCTTTTA TCCGTTACGG GCGCGGTTTG GCTACACCAC AGAAGATCCC
CAAAGGTTTA AAAGGGATTT AGAACAGATC AAGCCGATGC TTGACCAGCC TTTTGATTTT
GAAAAGCAGT TGGCTATGAC GTTCCCACAA CATATCCCAG CGCTGGAACA GACAGGGGCC
TATCGCTCCT TTCATAACAT GCTGCGGGGT CGCTGGAATC TTCTTCAACA CCATGGGACC
TACCCTAATA TGTACAGCCC CATTTCAAGA TAA
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| Protein sequence | MNDDLLLDCA LKLQQAGEVE PAIACYTKLL QHDPNHFIAW VNISLLHMQA DDLAKAVDGY
QKAIALQPHH PIPYSHMGIL LRKQGRHQEA LAHYHKALTL DPNQVDFHNN LGNLLRDMQQ
HKEAIEVYQQ SLKINPQQIE VYNTIGTIEV ELGRLGAAMQ HYLNALIAQP AAETIYSAMG
LTLESLCQHM QSSEDHLHTW LENWLSQMPD NPVEHAILRF KVKQILGLAL EQPHQQIIEA
LPTTRLKSPV DPSKQPTQPP RHASTHRRKD MVGLINLARS GSGYIHSLLD HHPQISTTPG
VYMSGYFGRH VWQQLTAHGF GQIAEQFATL YEVLFDARST VKPPPPFIGD VLGSRVGVGV
AEGFDRMGPQ RNEALKLNRD AFVAELQRRI HAQAYVDQGS VFELAHDAYE TVLARNPQQM
KVIFNHIHQI DPFSLSNLLK HRPDLRMLVI IRNPVQSCES WCIKADSDRL APTPYALYMH
IVSKLNRTLV DINHPLFARR DAVAIRLEDL KVALPSTMED VSHWMGIEFA ETMLQSTMQG
LEWWGDPSSV LYGKKQTANH GSQDPTKDKA GRLFSDQDRY ILNVLFYPLR ARFGYTTEDP
QRFKRDLEQI KPMLDQPFDF EKQLAMTFPQ HIPALEQTGA YRSFHNMLRG RWNLLQHHGT
YPNMYSPISR
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