Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2535 |
Symbol | |
ID | 4483850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3224855 |
End bp | 3225856 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723283 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport system protein |
Protein accession | YP_866441 |
Protein GI | 117925824 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0754711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TTGCTGCGCT CATGCCATCA AGAGAGCTTT GGAGAACGCC CTTATTAAGC GGAACCACAT CTCTGTGGAT CCTCTGCCTT GTGCTGATTG CAGGGTGCGA CCACCCTCAA CCTCCATTTC GGGTGGGCAC CAATATCTGG ATTGGCTATG AGTCGCTCTA TCTTGCGGAA TCCTTGGACG CCTTCAAAGG GAGCCCCATC CGCTTGGTGA CCATGCCCAA CACCACCCAA GTCATGTCTG CCCTACGCGC GGGCATGCTG GAAGCAGCAG CGACCACCCT GGATGAGGCC ATCTCCATGG CCGCGCACCT AAAAGATCTG AGGGTCGTTC TGGTCTTTGA TGTATCGCAT GGCGCGGATG TTATTGTCAG CACGCCCAAC ATCACCACCC TTGCACAACT GCGTGGTCGC CGTATTGGGG TTGAGAGTGG CGCGGTAGGG GCCATTTTAC TCAACGCGGG CTTAGAAGCC GCCGGTTTGA CCCCCGCCGA TGTGCAGATC AAACATCTTA CCGTCGATGA GCATGCCCAA GCCTTTTTAA GCCAACAGGT CGACGCCGTG GTCACCTTCG AGCCAGTGCG CTCTCAGCTT TTGGATCAAG GCGCCAACCT GCTGTTTGAC TCCAGCAAAA TTCCTGGCCG CATTGTGGAC GTGCTCATTA CCACAGAGCG CATTGCACAC AATCATCCAG AGACGTTGCG CCGATTAATC AATGGTCATT TTCAAGCACT TATCCATCTA AAACAGAACC CCGAACAAGC CCGTCAAAGC ATGACGACCC GTCAGCGTCT GCCCATGCGT GAGTTAGAAC AGGCCTTTCA AGGTATCGAG CTGCCCGATT TGGCGACCAA CCACCATTTA TTACAGGGCG AACCCGCCCC GCTGCTGGTG CAGACAACCT ATTTGGTTAA GCTTATGCAA AACCAACACA TGTTGGATCA ACCGGTTGAT ATGCAAAACT GCTTTACCGC AAATTGGCTA CCCCAACCAT GA
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Protein sequence | MSRIAALMPS RELWRTPLLS GTTSLWILCL VLIAGCDHPQ PPFRVGTNIW IGYESLYLAE SLDAFKGSPI RLVTMPNTTQ VMSALRAGML EAAATTLDEA ISMAAHLKDL RVVLVFDVSH GADVIVSTPN ITTLAQLRGR RIGVESGAVG AILLNAGLEA AGLTPADVQI KHLTVDEHAQ AFLSQQVDAV VTFEPVRSQL LDQGANLLFD SSKIPGRIVD VLITTERIAH NHPETLRRLI NGHFQALIHL KQNPEQARQS MTTRQRLPMR ELEQAFQGIE LPDLATNHHL LQGEPAPLLV QTTYLVKLMQ NQHMLDQPVD MQNCFTANWL PQP
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